Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC108078.1-201ENST00000508073 725 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 RNU2-53P-201ENST00000516257 147 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 RNU6-390P-201ENST00000516259 103 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 AC023632.1-201ENST00000518463 375 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.71□□□□□ -2.3
GTF2A1P52655 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.71□□□□□ -2.3
GTF2A1P52655 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.71□□□□□ -2.3
GTF2A1P52655 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.71□□□□□ -2.3
GTF2A1P52655 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.71□□□□□ -2.3
GTF2A1P52655 AC073410.2-201ENST00000603240 332 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 DPPA3P3-201ENST00000603842 430 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 BX284668.6-201ENST00000606899 438 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.71□□□□□ -2.3
GTF2A1P52655 AL445264.1-201ENST00000621719 171 ntBASIC0.71□□□□□ -2.3
GTF2A1P52655 DDX43P2-201ENST00000604753 1354 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 AC245060.5-201ENST00000610778 3293 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 HAUS6P2-201ENST00000433254 2404 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
GTF2A1P52655 RNU6-512P-201ENST00000364438 103 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 TRIM60P13-201ENST00000432350 1283 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.7□□□□□ -2.3
GTF2A1P52655 AC104058.1-201ENST00000448028 297 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 AC132479.1-201ENST00000449160 144 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.7□□□□□ -2.3
GTF2A1P52655 RPL26P26-201ENST00000480251 434 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.7□□□□□ -2.3
GTF2A1P52655 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.7□□□□□ -2.3
GTF2A1P52655 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.7□□□□□ -2.3
GTF2A1P52655 RNU6-322P-201ENST00000516010 103 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 AC096772.1-201ENST00000609146 564 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 AL357080.1-201ENST00000617394 239 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 uc_338.17-201ENST00000619633 179 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 AC091895.1-201ENST00000624494 256 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 AC120349.2-201ENST00000625002 298 ntBASIC0.7□□□□□ -2.3
GTF2A1P52655 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
GTF2A1P52655 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 RNU6-223P-201ENST00000362830 107 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 RNU6-97P-201ENST00000363387 104 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 RNU6-112P-201ENST00000363599 104 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 RNA5SP99-201ENST00000364020 114 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 AC119751.3-201ENST00000399720 670 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.69□□□□□ -2.3
GTF2A1P52655 AC138623.1-201ENST00000418060 216 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.69□□□□□ -2.3
GTF2A1P52655 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.69□□□□□ -2.3
GTF2A1P52655 snoU13.23-201ENST00000458863 104 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 RPL37P6-201ENST00000460682 294 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.69□□□□□ -2.3
GTF2A1P52655 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.69□□□□□ -2.3
GTF2A1P52655 RN7SKP219-201ENST00000516825 296 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 AC136628.3-201ENST00000521868 290 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.69□□□□□ -2.3
GTF2A1P52655 AC006518.2-201ENST00000542513 940 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.69□□□□□ -2.3
GTF2A1P52655 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 AC008088.1-201ENST00000580993 280 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 AC112220.2-201ENST00000605513 533 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 AC009033.1-201ENST00000624279 431 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
GTF2A1P52655 Y_RNA.99-201ENST00000363138 105 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 RNA5SP493-201ENST00000364115 91 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 RNU6-432P-201ENST00000384196 109 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 RNU6-1207P-201ENST00000384343 107 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 SNORA25-201ENST00000384384 134 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.68□□□□□ -2.3
GTF2A1P52655 EIF1P1-201ENST00000421436 341 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.68□□□□□ -2.3
GTF2A1P52655 BRK1P2-201ENST00000442875 223 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.68□□□□□ -2.3
GTF2A1P52655 MRPL42P4-201ENST00000453267 443 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 SNRPFP4-201ENST00000456366 242 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 RN7SKP258-201ENST00000517151 304 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.68□□□□□ -2.3
GTF2A1P52655 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.68□□□□□ -2.3
GTF2A1P52655 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.68□□□□□ -2.3
GTF2A1P52655 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.68□□□□□ -2.3
GTF2A1P52655 MIR4789-201ENST00000577469 82 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.68□□□□□ -2.3
GTF2A1P52655 AC243773.3-201ENST00000613270 256 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 AC027335.2-201ENST00000624030 375 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.68□□□□□ -2.3
GTF2A1P52655 AC068205.3-201ENST00000636385 468 ntBASIC0.68□□□□□ -2.3
GTF2A1P52655 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
GTF2A1P52655 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
GTF2A1P52655 Y_RNA.140-201ENST00000363474 103 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 RNU6-944P-201ENST00000364023 107 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 RNU6-898P-201ENST00000365627 104 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.67□□□□□ -2.3
GTF2A1P52655 RNU6-1065P-201ENST00000384513 106 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 MIR186-201ENST00000384988 86 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.67□□□□□ -2.3
GTF2A1P52655 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.67□□□□□ -2.3
GTF2A1P52655 AC010631.1-201ENST00000474150 156 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 AL163195.1-201ENST00000496941 348 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 AC093809.1-201ENST00000509155 340 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 AC093259.1-201ENST00000509755 300 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 SNORA76.2-201ENST00000517095 137 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms