Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNU6-266P-201ENST00000364225 107 ntBASIC4□□□□□ -1.77
MRE11P49959 RNU6-1303P-201ENST00000364841 107 ntBASIC4□□□□□ -1.77
MRE11P49959 Y_RNA.364-201ENST00000365532 101 ntBASIC4□□□□□ -1.77
MRE11P49959 RNU6-214P-201ENST00000384130 107 ntBASIC4□□□□□ -1.77
MRE11P49959 RNY1P14-201ENST00000384426 108 ntBASIC4□□□□□ -1.77
MRE11P49959 RNU6-306P-201ENST00000384617 107 ntBASIC4□□□□□ -1.77
MRE11P49959 RNU6-331P-201ENST00000384724 107 ntBASIC4□□□□□ -1.77
MRE11P49959 AP000567.1-201ENST00000406413 156 ntBASIC4□□□□□ -1.77
MRE11P49959 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4□□□□□ -1.77
MRE11P49959 Z99755.1-201ENST00000414048 380 ntBASIC4□□□□□ -1.77
MRE11P49959 MTATP6P4-201ENST00000427725 675 ntBASIC4□□□□□ -1.77
MRE11P49959 RPL26P6-201ENST00000440913 438 ntBASIC4□□□□□ -1.77
MRE11P49959 RPS24P6-201ENST00000452670 400 ntBASIC4□□□□□ -1.77
MRE11P49959 SNORD5.1-201ENST00000458800 75 ntBASIC4□□□□□ -1.77
MRE11P49959 RPL23AP67-201ENST00000465341 474 ntBASIC4□□□□□ -1.77
MRE11P49959 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4□□□□□ -1.77
MRE11P49959 MTCO2P24-201ENST00000515611 426 ntBASIC4□□□□□ -1.77
MRE11P49959 RNU6-470P-201ENST00000515954 104 ntBASIC4□□□□□ -1.77
MRE11P49959 Y_RNA.661-201ENST00000516003 99 ntBASIC4□□□□□ -1.77
MRE11P49959 RNU6-764P-201ENST00000516396 105 ntBASIC4□□□□□ -1.77
MRE11P49959 ERHP1-201ENST00000523006 310 ntBASIC4□□□□□ -1.77
MRE11P49959 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4□□□□□ -1.77
MRE11P49959 AL121603.1-201ENST00000553815 142 ntBASIC4□□□□□ -1.77
MRE11P49959 MIR3149-201ENST00000584629 83 ntBASIC4□□□□□ -1.77
MRE11P49959 AL451007.1-201ENST00000595491 289 ntBASIC4□□□□□ -1.77
MRE11P49959 RPL12P50-201ENST00000603116 116 ntBASIC4□□□□□ -1.77
MRE11P49959 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
MRE11P49959 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
MRE11P49959 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MRE11P49959 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
MRE11P49959 AC138393.1-203ENST00000327086 343 ntBASIC3.99□□□□□ -1.77
MRE11P49959 MIR449A-201ENST00000362113 91 ntBASIC3.99□□□□□ -1.77
MRE11P49959 SNORA80A-201ENST00000363922 136 ntBASIC3.99□□□□□ -1.77
MRE11P49959 Y_RNA.452-201ENST00000384202 108 ntBASIC3.99□□□□□ -1.77
MRE11P49959 SNORA36C-201ENST00000384289 132 ntBASIC3.99□□□□□ -1.77
MRE11P49959 Y_RNA.496-201ENST00000384444 101 ntBASIC3.99□□□□□ -1.77
MRE11P49959 BX842559.1-201ENST00000419615 532 ntBASIC3.99□□□□□ -1.77
MRE11P49959 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.99□□□□□ -1.77
MRE11P49959 USP9YP30-201ENST00000430729 455 ntBASIC3.99□□□□□ -1.77
MRE11P49959 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.99□□□□□ -1.77
MRE11P49959 MTATP8P1-201ENST00000467115 207 ntBASIC3.99□□□□□ -1.77
MRE11P49959 RPL21P13-201ENST00000488305 481 ntBASIC3.99□□□□□ -1.77
MRE11P49959 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.99□□□□□ -1.77
MRE11P49959 RNU1-143P-201ENST00000516296 146 ntBASIC3.99□□□□□ -1.77
MRE11P49959 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MRE11P49959 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.99□□□□□ -1.77
MRE11P49959 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.99□□□□□ -1.77
MRE11P49959 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.99□□□□□ -1.77
MRE11P49959 MIR4325-201ENST00000583049 90 ntBASIC3.99□□□□□ -1.77
MRE11P49959 SNORD84-203ENST00000584275 78 ntBASIC3.99□□□□□ -1.77
MRE11P49959 AC073539.2-201ENST00000597113 165 ntBASIC3.99□□□□□ -1.77
MRE11P49959 U1.23-201ENST00000610293 146 ntBASIC3.99□□□□□ -1.77
MRE11P49959 AC006157.1-201ENST00000611750 366 ntBASIC3.99□□□□□ -1.77
MRE11P49959 AL161423.1-201ENST00000613700 262 ntBASIC3.99□□□□□ -1.77
MRE11P49959 RNU1-68P-201ENST00000615382 146 ntBASIC3.99□□□□□ -1.77
MRE11P49959 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.99□□□□□ -1.77
MRE11P49959 U1.39-201ENST00000621562 146 ntBASIC3.99□□□□□ -1.77
MRE11P49959 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
MRE11P49959 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
MRE11P49959 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.99□□□□□ -1.77
MRE11P49959 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MRE11P49959 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MRE11P49959 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MRE11P49959 AL136164.4-201ENST00000625013 2135 ntBASIC3.98□□□□□ -1.77
MRE11P49959 AC009812.4-201ENST00000569134 1805 ntBASIC3.98□□□□□ -1.77
MRE11P49959 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MRE11P49959 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MRE11P49959 RNU6-50P-201ENST00000362356 103 ntBASIC3.98□□□□□ -1.77
MRE11P49959 Y_RNA.401-201ENST00000383965 117 ntBASIC3.98□□□□□ -1.77
MRE11P49959 Y_RNA.480-201ENST00000384364 102 ntBASIC3.98□□□□□ -1.77
MRE11P49959 Y_RNA.527-201ENST00000384573 102 ntBASIC3.98□□□□□ -1.77
MRE11P49959 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.98□□□□□ -1.77
MRE11P49959 RPL21P90-201ENST00000415692 466 ntBASIC3.98□□□□□ -1.77
MRE11P49959 AL356968.1-201ENST00000416622 474 ntBASIC3.98□□□□□ -1.77
MRE11P49959 AC005326.1-201ENST00000429197 123 ntBASIC3.98□□□□□ -1.77
MRE11P49959 HMGB1P27-201ENST00000431429 603 ntBASIC3.98□□□□□ -1.77
MRE11P49959 AC073063.1-201ENST00000434352 607 ntBASIC3.98□□□□□ -1.77
MRE11P49959 AL133162.1-201ENST00000463228 453 ntBASIC3.98□□□□□ -1.77
MRE11P49959 RPL21P10-201ENST00000463521 490 ntBASIC3.98□□□□□ -1.77
MRE11P49959 RPL31P60-201ENST00000478450 367 ntBASIC3.98□□□□□ -1.77
MRE11P49959 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.98□□□□□ -1.77
MRE11P49959 AC093663.1-201ENST00000497190 394 ntBASIC3.98□□□□□ -1.77
MRE11P49959 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.98□□□□□ -1.77
MRE11P49959 AC092436.3-201ENST00000511788 257 ntBASIC3.98□□□□□ -1.77
MRE11P49959 RNU6-914P-201ENST00000516749 109 ntBASIC3.98□□□□□ -1.77
MRE11P49959 RNA5SP468-201ENST00000516782 93 ntBASIC3.98□□□□□ -1.77
MRE11P49959 RNU6-699P-201ENST00000517081 110 ntBASIC3.98□□□□□ -1.77
MRE11P49959 AC007991.1-201ENST00000522680 631 ntBASIC3.98□□□□□ -1.77
MRE11P49959 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
MRE11P49959 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.98□□□□□ -1.77
MRE11P49959 AC004817.2-201ENST00000561794 651 ntBASIC3.98□□□□□ -1.77
MRE11P49959 AC008269.2-201ENST00000561915 1105 ntBASIC3.98□□□□□ -1.77
MRE11P49959 AC011494.1-201ENST00000596454 237 ntBASIC3.98□□□□□ -1.77
MRE11P49959 7SK.7-201ENST00000603504 247 ntBASIC3.98□□□□□ -1.77
MRE11P49959 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MRE11P49959 AL162373.1-201ENST00000620433 407 ntBASIC3.98□□□□□ -1.77
MRE11P49959 SNORA50A-202ENST00000629536 136 ntBASIC3.98□□□□□ -1.77
MRE11P49959 AC119674.1-207ENST00000641355 633 ntBASIC3.98□□□□□ -1.77
MRE11P49959 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MRE11P49959 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms