Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.7□□□□□ -2.14
RFC3P40938 MIR3529-201ENST00000637713 78 ntBASIC1.7□□□□□ -2.14
RFC3P40938 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RFC3P40938 AL445523.1-201ENST00000451184 1362 ntBASIC1.7□□□□□ -2.14
RFC3P40938 ZNF876P-202ENST00000398732 1485 ntBASIC1.69□□□□□ -2.14
RFC3P40938 RBBP8P1-201ENST00000449447 1844 ntBASIC1.69□□□□□ -2.14
RFC3P40938 RNU6-858P-201ENST00000362436 107 ntBASIC1.69□□□□□ -2.14
RFC3P40938 RNU6-487P-201ENST00000365430 104 ntBASIC1.69□□□□□ -2.14
RFC3P40938 MIR518A2-201ENST00000384966 87 ntBASIC1.69□□□□□ -2.14
RFC3P40938 MIR9-3-201ENST00000385084 90 ntBASIC1.69□□□□□ -2.14
RFC3P40938 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.69□□□□□ -2.14
RFC3P40938 RPL22P17-201ENST00000438729 315 ntBASIC1.69□□□□□ -2.14
RFC3P40938 AL353689.1-201ENST00000438895 199 ntBASIC1.69□□□□□ -2.14
RFC3P40938 DNAJC19P4-201ENST00000440115 345 ntBASIC1.69□□□□□ -2.14
RFC3P40938 AL583843.1-201ENST00000456070 346 ntBASIC1.69□□□□□ -2.14
RFC3P40938 DUXAP8-207ENST00000456786 622 ntBASIC1.69□□□□□ -2.14
RFC3P40938 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.69□□□□□ -2.14
RFC3P40938 RPS29P11-201ENST00000496507 171 ntBASIC1.69□□□□□ -2.14
RFC3P40938 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.69□□□□□ -2.14
RFC3P40938 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.69□□□□□ -2.14
RFC3P40938 IMMP1LP2-201ENST00000552954 492 ntBASIC1.69□□□□□ -2.14
RFC3P40938 AC025678.1-201ENST00000567861 338 ntBASIC1.69□□□□□ -2.14
RFC3P40938 AC026271.5-201ENST00000577873 130 ntBASIC1.69□□□□□ -2.14
RFC3P40938 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
RFC3P40938 MIR4999-201ENST00000585029 91 ntBASIC1.69□□□□□ -2.14
RFC3P40938 AC073410.2-201ENST00000603240 332 ntBASIC1.69□□□□□ -2.14
RFC3P40938 AC098614.4-201ENST00000607601 462 ntBASIC1.69□□□□□ -2.14
RFC3P40938 AC084768.2-201ENST00000622736 221 ntBASIC1.69□□□□□ -2.14
RFC3P40938 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.69□□□□□ -2.14
RFC3P40938 AC106754.1-201ENST00000562632 1513 ntBASIC1.69□□□□□ -2.14
RFC3P40938 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.68□□□□□ -2.14
RFC3P40938 MIR412-201ENST00000362142 91 ntBASIC1.68□□□□□ -2.14
RFC3P40938 RNU6-942P-201ENST00000363002 107 ntBASIC1.68□□□□□ -2.14
RFC3P40938 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RFC3P40938 RNU6-1032P-201ENST00000384100 107 ntBASIC1.68□□□□□ -2.14
RFC3P40938 RNU6-1200P-201ENST00000384162 107 ntBASIC1.68□□□□□ -2.14
RFC3P40938 RNU6-925P-201ENST00000384629 104 ntBASIC1.68□□□□□ -2.14
RFC3P40938 MIR513B-201ENST00000385136 84 ntBASIC1.68□□□□□ -2.14
RFC3P40938 Y_RNA.623-201ENST00000411128 95 ntBASIC1.68□□□□□ -2.14
RFC3P40938 AC138623.1-201ENST00000418060 216 ntBASIC1.68□□□□□ -2.14
RFC3P40938 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.68□□□□□ -2.14
RFC3P40938 RPL23AP30-201ENST00000432419 501 ntBASIC1.68□□□□□ -2.14
RFC3P40938 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.68□□□□□ -2.14
RFC3P40938 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.68□□□□□ -2.14
RFC3P40938 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RFC3P40938 SSXP1-201ENST00000453640 473 ntBASIC1.68□□□□□ -2.14
RFC3P40938 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.68□□□□□ -2.14
RFC3P40938 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.68□□□□□ -2.14
RFC3P40938 MRPS17P9-201ENST00000511924 393 ntBASIC1.68□□□□□ -2.14
RFC3P40938 RNA5SP182-201ENST00000516064 82 ntBASIC1.68□□□□□ -2.14
RFC3P40938 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.68□□□□□ -2.14
RFC3P40938 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.68□□□□□ -2.14
RFC3P40938 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.68□□□□□ -2.14
RFC3P40938 SNRPGP17-201ENST00000603780 214 ntBASIC1.68□□□□□ -2.14
RFC3P40938 AC005034.5-201ENST00000604219 466 ntBASIC1.68□□□□□ -2.14
RFC3P40938 ELOCP5-201ENST00000604924 333 ntBASIC1.68□□□□□ -2.14
RFC3P40938 AC093788.1-201ENST00000609356 927 ntBASIC1.68□□□□□ -2.14
RFC3P40938 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.68□□□□□ -2.14
RFC3P40938 AC024940.5-201ENST00000622889 474 ntBASIC1.68□□□□□ -2.14
RFC3P40938 HAUS6P2-201ENST00000433254 2404 ntBASIC1.68□□□□□ -2.14
RFC3P40938 RNU5E-1-201ENST00000362477 120 ntBASIC1.67□□□□□ -2.14
RFC3P40938 RNA5SP276-201ENST00000362580 94 ntBASIC1.67□□□□□ -2.14
RFC3P40938 SNORD115.1-201ENST00000391109 76 ntBASIC1.67□□□□□ -2.14
RFC3P40938 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.67□□□□□ -2.14
RFC3P40938 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.67□□□□□ -2.14
RFC3P40938 SSR1P2-201ENST00000415208 787 ntBASIC1.67□□□□□ -2.14
RFC3P40938 RPL23AP39-201ENST00000415533 405 ntBASIC1.67□□□□□ -2.14
RFC3P40938 RPL22P18-201ENST00000417197 377 ntBASIC1.67□□□□□ -2.14
RFC3P40938 XKRYP1-201ENST00000423438 492 ntBASIC1.67□□□□□ -2.14
RFC3P40938 AL627311.1-201ENST00000431514 115 ntBASIC1.67□□□□□ -2.14
RFC3P40938 XKRYP2-201ENST00000432915 492 ntBASIC1.67□□□□□ -2.14
RFC3P40938 AC118469.1-201ENST00000442943 488 ntBASIC1.67□□□□□ -2.14
RFC3P40938 MTND6P13-201ENST00000443510 523 ntBASIC1.67□□□□□ -2.14
RFC3P40938 AL606517.1-201ENST00000446914 387 ntBASIC1.67□□□□□ -2.14
RFC3P40938 NDUFB1P2-201ENST00000449477 176 ntBASIC1.67□□□□□ -2.14
RFC3P40938 AL137159.1-201ENST00000452808 512 ntBASIC1.67□□□□□ -2.14
RFC3P40938 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.67□□□□□ -2.14
RFC3P40938 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RFC3P40938 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.67□□□□□ -2.14
RFC3P40938 RNU2-53P-201ENST00000516257 147 ntBASIC1.67□□□□□ -2.14
RFC3P40938 RNU7-51P-201ENST00000516560 62 ntBASIC1.67□□□□□ -2.14
RFC3P40938 RNU6-586P-201ENST00000517265 104 ntBASIC1.67□□□□□ -2.14
RFC3P40938 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.67□□□□□ -2.14
RFC3P40938 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.67□□□□□ -2.14
RFC3P40938 AC135279.1-201ENST00000543493 504 ntBASIC1.67□□□□□ -2.14
RFC3P40938 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.67□□□□□ -2.14
RFC3P40938 CR383656.8-201ENST00000549046 145 ntBASIC1.67□□□□□ -2.14
RFC3P40938 ZNF519P3-201ENST00000557158 1032 ntBASIC1.67□□□□□ -2.14
RFC3P40938 BNIP3P30-201ENST00000601184 574 ntBASIC1.67□□□□□ -2.14
RFC3P40938 AP000811.1-201ENST00000603803 651 ntBASIC1.67□□□□□ -2.14
RFC3P40938 AC018714.1-201ENST00000605028 208 ntBASIC1.67□□□□□ -2.14
RFC3P40938 AC021646.1-201ENST00000605469 484 ntBASIC1.67□□□□□ -2.14
RFC3P40938 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.67□□□□□ -2.14
RFC3P40938 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.67□□□□□ -2.14
RFC3P40938 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RFC3P40938 ZNF72P-201ENST00000425869 1908 ntBASIC1.66□□□□□ -2.14
RFC3P40938 SNORD113-6-201ENST00000363345 75 ntBASIC1.66□□□□□ -2.14
RFC3P40938 RNU6-660P-201ENST00000364566 109 ntBASIC1.66□□□□□ -2.14
RFC3P40938 RNU6-72P-201ENST00000384285 79 ntBASIC1.66□□□□□ -2.14
RFC3P40938 RNU6-809P-201ENST00000384461 107 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms