Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AC008267.5-201ENST00000424928 265 ntBASIC0.76□□□□□ -2.29
SDC4P31431 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.76□□□□□ -2.29
SDC4P31431 TRIM60P13-201ENST00000432350 1283 ntBASIC0.76□□□□□ -2.29
SDC4P31431 GTF2IP3-201ENST00000433887 494 ntBASIC0.76□□□□□ -2.29
SDC4P31431 AC092427.1-201ENST00000439177 601 ntBASIC0.76□□□□□ -2.29
SDC4P31431 AC108059.3-201ENST00000456388 214 ntBASIC0.76□□□□□ -2.29
SDC4P31431 ATP5EP1-201ENST00000510257 156 ntBASIC0.76□□□□□ -2.29
SDC4P31431 AP003392.2-201ENST00000527269 208 ntBASIC0.76□□□□□ -2.29
SDC4P31431 AC022616.8-201ENST00000533569 253 ntBASIC0.76□□□□□ -2.29
SDC4P31431 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.76□□□□□ -2.29
SDC4P31431 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
SDC4P31431 AC013470.4-201ENST00000619978 986 ntBASIC0.76□□□□□ -2.29
SDC4P31431 MIR1322-201ENST00000638013 71 ntBASIC0.76□□□□□ -2.29
SDC4P31431 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SDC4P31431 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SDC4P31431 RNU1-124P-201ENST00000363861 145 ntBASIC0.75□□□□□ -2.29
SDC4P31431 MIR520E-201ENST00000384867 87 ntBASIC0.75□□□□□ -2.29
SDC4P31431 DHFRP6-201ENST00000401776 268 ntBASIC0.75□□□□□ -2.29
SDC4P31431 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.75□□□□□ -2.29
SDC4P31431 AC245047.4-201ENST00000433189 144 ntBASIC0.75□□□□□ -2.29
SDC4P31431 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.75□□□□□ -2.29
SDC4P31431 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.75□□□□□ -2.29
SDC4P31431 AC079140.2-201ENST00000506193 142 ntBASIC0.75□□□□□ -2.29
SDC4P31431 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.75□□□□□ -2.29
SDC4P31431 AC112198.4-201ENST00000515450 351 ntBASIC0.75□□□□□ -2.29
SDC4P31431 RNU6-714P-201ENST00000516963 103 ntBASIC0.75□□□□□ -2.29
SDC4P31431 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.75□□□□□ -2.29
SDC4P31431 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.75□□□□□ -2.29
SDC4P31431 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.75□□□□□ -2.29
SDC4P31431 AC093249.1-201ENST00000567049 203 ntBASIC0.75□□□□□ -2.29
SDC4P31431 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.75□□□□□ -2.29
SDC4P31431 AC106800.4-201ENST00000614905 153 ntBASIC0.75□□□□□ -2.29
SDC4P31431 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SDC4P31431 SNORD114-19-201ENST00000363072 75 ntBASIC0.74□□□□□ -2.29
SDC4P31431 SNORA25.9-201ENST00000365087 128 ntBASIC0.74□□□□□ -2.29
SDC4P31431 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.74□□□□□ -2.29
SDC4P31431 AL139397.2-201ENST00000404529 772 ntBASIC0.74□□□□□ -2.29
SDC4P31431 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.74□□□□□ -2.29
SDC4P31431 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.74□□□□□ -2.29
SDC4P31431 AL078601.1-201ENST00000444542 271 ntBASIC0.74□□□□□ -2.29
SDC4P31431 PGBD4P5-201ENST00000445958 426 ntBASIC0.74□□□□□ -2.29
SDC4P31431 RPL37P6-201ENST00000460682 294 ntBASIC0.74□□□□□ -2.29
SDC4P31431 RPL9P9-202ENST00000466501 579 ntBASIC0.74□□□□□ -2.29
SDC4P31431 AC114982.1-201ENST00000469402 321 ntBASIC0.74□□□□□ -2.29
SDC4P31431 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.74□□□□□ -2.29
SDC4P31431 SNORD116-28-201ENST00000516123 91 ntBASIC0.74□□□□□ -2.29
SDC4P31431 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.74□□□□□ -2.29
SDC4P31431 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.74□□□□□ -2.29
SDC4P31431 AF038458.1-201ENST00000588406 262 ntBASIC0.74□□□□□ -2.29
SDC4P31431 AC083806.3-201ENST00000614016 455 ntBASIC0.74□□□□□ -2.29
SDC4P31431 MIR6835-201ENST00000621552 64 ntBASIC0.74□□□□□ -2.29
SDC4P31431 SNRPEP3-201ENST00000338402 276 ntBASIC0.73□□□□□ -2.29
SDC4P31431 Y_RNA.25-201ENST00000362528 102 ntBASIC0.73□□□□□ -2.29
SDC4P31431 Y_RNA.191-201ENST00000363972 113 ntBASIC0.73□□□□□ -2.29
SDC4P31431 RNU6-353P-201ENST00000364266 108 ntBASIC0.73□□□□□ -2.29
SDC4P31431 MIR515-2-201ENST00000384883 83 ntBASIC0.73□□□□□ -2.29
SDC4P31431 MIR515-1-201ENST00000384884 83 ntBASIC0.73□□□□□ -2.29
SDC4P31431 AC119751.3-201ENST00000399720 670 ntBASIC0.73□□□□□ -2.29
SDC4P31431 TAF13P2-201ENST00000416876 286 ntBASIC0.73□□□□□ -2.29
SDC4P31431 EIF1P1-201ENST00000421436 341 ntBASIC0.73□□□□□ -2.29
SDC4P31431 BX119904.4-201ENST00000424402 301 ntBASIC0.73□□□□□ -2.29
SDC4P31431 UBE2V2P3-201ENST00000433562 437 ntBASIC0.73□□□□□ -2.29
SDC4P31431 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.73□□□□□ -2.29
SDC4P31431 JTBP1-201ENST00000441314 247 ntBASIC0.73□□□□□ -2.29
SDC4P31431 TAF9P1-201ENST00000445421 515 ntBASIC0.73□□□□□ -2.29
SDC4P31431 TAF9P2-201ENST00000454958 515 ntBASIC0.73□□□□□ -2.29
SDC4P31431 AC023194.1-201ENST00000493084 308 ntBASIC0.73□□□□□ -2.29
SDC4P31431 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.73□□□□□ -2.29
SDC4P31431 AC114981.1-201ENST00000503897 678 ntBASIC0.73□□□□□ -2.29
SDC4P31431 RNU6-1261P-201ENST00000517194 104 ntBASIC0.73□□□□□ -2.29
SDC4P31431 AC018630.3-201ENST00000542637 96 ntBASIC0.73□□□□□ -2.29
SDC4P31431 MIR3937-201ENST00000580135 106 ntBASIC0.73□□□□□ -2.29
SDC4P31431 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.73□□□□□ -2.29
SDC4P31431 AC073410.2-201ENST00000603240 332 ntBASIC0.73□□□□□ -2.29
SDC4P31431 AL359740.1-201ENST00000624340 592 ntBASIC0.73□□□□□ -2.29
SDC4P31431 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.73□□□□□ -2.29
SDC4P31431 AC008993.2-201ENST00000631744 806 ntBASIC0.73□□□□□ -2.29
SDC4P31431 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.72□□□□□ -2.29
SDC4P31431 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.72□□□□□ -2.29
SDC4P31431 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.72□□□□□ -2.29
SDC4P31431 AC013410.2-201ENST00000422627 201 ntBASIC0.72□□□□□ -2.29
SDC4P31431 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.72□□□□□ -2.29
SDC4P31431 MTND5P15-201ENST00000434246 349 ntBASIC0.72□□□□□ -2.29
SDC4P31431 UBE2V1P8-201ENST00000437166 265 ntBASIC0.72□□□□□ -2.29
SDC4P31431 BRK1P2-201ENST00000442875 223 ntBASIC0.72□□□□□ -2.29
SDC4P31431 MTCO3P45-201ENST00000443036 613 ntBASIC0.72□□□□□ -2.29
SDC4P31431 RNFT1P2-201ENST00000443064 757 ntBASIC0.72□□□□□ -2.29
SDC4P31431 MTATP6P30-201ENST00000443540 664 ntBASIC0.72□□□□□ -2.29
SDC4P31431 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.72□□□□□ -2.29
SDC4P31431 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SDC4P31431 RPL23AP35-201ENST00000451906 501 ntBASIC0.72□□□□□ -2.29
SDC4P31431 RPL31P3-201ENST00000458430 332 ntBASIC0.72□□□□□ -2.29
SDC4P31431 RPL26P26-201ENST00000480251 434 ntBASIC0.72□□□□□ -2.29
SDC4P31431 AC117454.1-201ENST00000491120 168 ntBASIC0.72□□□□□ -2.29
SDC4P31431 HMGN1P13-201ENST00000505795 138 ntBASIC0.72□□□□□ -2.29
SDC4P31431 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.72□□□□□ -2.29
SDC4P31431 AC019176.1-201ENST00000518519 225 ntBASIC0.72□□□□□ -2.29
SDC4P31431 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.72□□□□□ -2.29
SDC4P31431 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.72□□□□□ -2.29
SDC4P31431 HSPE1P4-201ENST00000550617 308 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms