Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HOXC12P31275 CR383656.8-201ENST00000549046 145 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 AL136164.4-201ENST00000625013 2135 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 AC243829.7-201ENST00000633081 225 ntBASIC3.84□□□□□ -1.79
HOXC12P31275 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXC12P31275 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
HOXC12P31275 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HOXC12P31275 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.84□□□□□ -1.8
HOXC12P31275 AL672167.1-203ENST00000641299 2975 ntBASIC3.84□□□□□ -1.8
HOXC12P31275 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HOXC12P31275 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HOXC12P31275 ADAM3A-203ENST00000461344 2157 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC12P31275 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC12P31275 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC12P31275 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC12P31275 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC12P31275 Y_RNA.19-201ENST00000362462 99 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 Y_RNA.26-201ENST00000362539 101 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 RNU1-132P-201ENST00000364300 164 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 RNU4-9P-201ENST00000364951 139 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 RNU1-140P-201ENST00000365040 165 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 MIR554-201ENST00000384874 96 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 MIR1302-6-201ENST00000408466 90 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 SNORA74C-2-201ENST00000411179 201 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXC12P31275 AC004552.1-201ENST00000419089 348 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 RPL21P40-201ENST00000428586 483 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 FCF1P4-201ENST00000448326 183 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 AL353705.4-201ENST00000449661 238 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 snoU13.28-201ENST00000459235 104 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 RN7SL542P-201ENST00000467147 294 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 SNRPGP7-201ENST00000469016 106 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 RPS26P3-201ENST00000470205 348 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 AC090543.2-201ENST00000483963 348 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 AC004057.1-201ENST00000485827 348 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 RNA5SP143-201ENST00000516936 115 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 AC109329.1-201ENST00000518744 317 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 TVP23BP1-201ENST00000557500 617 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXC12P31275 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXC12P31275 RPL7P50-201ENST00000600588 727 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 HSPE1P7-201ENST00000604681 321 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HOXC12P31275 AC007656.2-201ENST00000624902 4547 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC12P31275 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC12P31275 AC002546.1-201ENST00000588041 2504 ntBASIC3.83□□□□□ -1.8
HOXC12P31275 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HOXC12P31275 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC12P31275 MIR331-201ENST00000362302 94 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 Y_RNA.288-201ENST00000364854 92 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 Y_RNA.307-201ENST00000365022 117 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 RNU6-806P-201ENST00000365147 105 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC12P31275 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HOXC12P31275 Y_RNA.461-201ENST00000384263 103 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 RNU6-907P-201ENST00000390924 102 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 SNORA11F-201ENST00000408237 128 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC12P31275 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC12P31275 BPY2DP-201ENST00000422208 265 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC12P31275 RPL23AP46-201ENST00000438548 490 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 HMGN2P10-201ENST00000448085 265 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 AC012308.1-201ENST00000451232 178 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC12P31275 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC12P31275 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC12P31275 AL136097.1-201ENST00000456945 913 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 RPL23AP75-201ENST00000491601 451 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC12P31275 RNU6-1143P-201ENST00000516125 104 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC12P31275 HSPE1P20-201ENST00000538133 289 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 AL391261.3-201ENST00000557194 520 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 AC021739.1-201ENST00000559631 174 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 AL160290.3-201ENST00000604869 165 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 AC019159.1-201ENST00000605094 187 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 AL138721.1-201ENST00000616756 179 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 AC140113.4-201ENST00000622087 222 ntBASIC3.82□□□□□ -1.8
HOXC12P31275 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HOXC12P31275 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC12P31275 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
HOXC12P31275 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC12P31275 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
HOXC12P31275 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC12P31275 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC12P31275 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HOXC12P31275 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC12P31275 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC12P31275 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC12P31275 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HOXC12P31275 OR56A5-201ENST00000340110 738 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 MIR383-201ENST00000362257 73 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 RNU1-76P-201ENST00000362903 159 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC12P31275 MIR544A-201ENST00000384855 91 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 SNORA11.1-201ENST00000408133 129 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 AL358453.1-201ENST00000422522 250 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms