Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 OR5B19P-201ENST00000531766 928 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 AL359212.1-201ENST00000556608 614 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXA9P31269 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXA9P31269 AC007229.1-201ENST00000590455 412 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 AL590229.1-201ENST00000603497 542 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 AC009314.1-201ENST00000603871 304 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 AC016727.1-205ENST00000605437 569 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 AC010678.1-201ENST00000614118 713 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 AL158063.1-201ENST00000615349 536 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 AC108479.2-201ENST00000617314 601 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXA9P31269 MIR7157-201ENST00000635801 60 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 MTND5P42-201ENST00000637720 498 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HOXA9P31269 TEX21P-201ENST00000447107 1476 ntBASIC2.01□□□□□ -2.09
HOXA9P31269 AC009487.4-201ENST00000624969 3585 ntBASIC2□□□□□ -2.09
HOXA9P31269 AC004520.1-201ENST00000608362 1413 ntBASIC2□□□□□ -2.09
HOXA9P31269 ELL2P3-201ENST00000457883 1602 ntBASIC2□□□□□ -2.09
HOXA9P31269 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
HOXA9P31269 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2□□□□□ -2.09
HOXA9P31269 Y_RNA.22-201ENST00000362492 102 ntBASIC2□□□□□ -2.09
HOXA9P31269 RNA5SP160-201ENST00000364866 120 ntBASIC2□□□□□ -2.09
HOXA9P31269 RNA5SP138-201ENST00000365098 114 ntBASIC2□□□□□ -2.09
HOXA9P31269 RPS3AP36-201ENST00000398190 775 ntBASIC2□□□□□ -2.09
HOXA9P31269 RNU6-1328P-201ENST00000410938 106 ntBASIC2□□□□□ -2.09
HOXA9P31269 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
HOXA9P31269 ELOCP4-201ENST00000420090 333 ntBASIC2□□□□□ -2.09
HOXA9P31269 AL592045.1-201ENST00000429867 352 ntBASIC2□□□□□ -2.09
HOXA9P31269 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2□□□□□ -2.09
HOXA9P31269 GPM6BP2-201ENST00000432046 144 ntBASIC2□□□□□ -2.09
HOXA9P31269 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2□□□□□ -2.09
HOXA9P31269 MTND4P25-201ENST00000441039 533 ntBASIC2□□□□□ -2.09
HOXA9P31269 GPM6BP1-201ENST00000446387 144 ntBASIC2□□□□□ -2.09
HOXA9P31269 SNRPFP4-201ENST00000456366 242 ntBASIC2□□□□□ -2.09
HOXA9P31269 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
HOXA9P31269 KLF3P2-201ENST00000465138 268 ntBASIC2□□□□□ -2.09
HOXA9P31269 AC090515.1-201ENST00000465295 476 ntBASIC2□□□□□ -2.09
HOXA9P31269 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2□□□□□ -2.09
HOXA9P31269 RPS27AP10-201ENST00000496103 208 ntBASIC2□□□□□ -2.09
HOXA9P31269 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2□□□□□ -2.09
HOXA9P31269 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2□□□□□ -2.09
HOXA9P31269 AC011979.2-201ENST00000527568 352 ntBASIC2□□□□□ -2.09
HOXA9P31269 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2□□□□□ -2.09
HOXA9P31269 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2□□□□□ -2.09
HOXA9P31269 AC119751.7-201ENST00000600494 245 ntBASIC2□□□□□ -2.09
HOXA9P31269 AC073544.2-201ENST00000601155 540 ntBASIC2□□□□□ -2.09
HOXA9P31269 SEPT7P9-203ENST00000604116 343 ntBASIC2□□□□□ -2.09
HOXA9P31269 AC090578.1-201ENST00000604955 591 ntBASIC2□□□□□ -2.09
HOXA9P31269 AC130324.3-201ENST00000614165 542 ntBASIC2□□□□□ -2.09
HOXA9P31269 AP001506.1-201ENST00000615444 211 ntBASIC2□□□□□ -2.09
HOXA9P31269 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2□□□□□ -2.09
HOXA9P31269 AC091932.3-201ENST00000624223 323 ntBASIC2□□□□□ -2.09
HOXA9P31269 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
HOXA9P31269 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HOXA9P31269 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HOXA9P31269 SNORA4.3-201ENST00000365564 137 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 SNORD116-1-201ENST00000384335 95 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 Y_RNA.534-201ENST00000384599 112 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HOXA9P31269 RNA5SP213-201ENST00000391031 106 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 RNU6-817P-201ENST00000391083 104 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 RN7SKP158-201ENST00000410453 326 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 RNU2-40P-201ENST00000410833 196 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 RNU2-68P-201ENST00000410878 191 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 AC127391.1-201ENST00000411737 98 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 BPY2DP-201ENST00000422208 265 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 AC137499.1-201ENST00000427602 88 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 ISCA1P6-201ENST00000427740 390 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 HMGB1P27-201ENST00000431429 603 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 RPS15AP5-201ENST00000436276 388 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 AC004383.1-201ENST00000438135 289 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.99□□□□□ -2.09
HOXA9P31269 MTCYBP1-201ENST00000454315 1119 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.99□□□□□ -2.09
HOXA9P31269 snoU109.1-201ENST00000459339 135 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.99□□□□□ -2.09
HOXA9P31269 AC007182.2-201ENST00000489251 402 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 AC104564.1-201ENST00000493028 407 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.99□□□□□ -2.09
HOXA9P31269 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.99□□□□□ -2.09
HOXA9P31269 SCARNA24.1-201ENST00000516465 137 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 RNU7-51P-201ENST00000516560 62 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 Y_RNA.695-201ENST00000516715 107 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 RNU6-703P-201ENST00000516946 107 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.99□□□□□ -2.09
HOXA9P31269 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.99□□□□□ -2.09
HOXA9P31269 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.99□□□□□ -2.09
HOXA9P31269 AL356057.1-201ENST00000533798 831 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.99□□□□□ -2.09
HOXA9P31269 MIR3913-1-201ENST00000577744 102 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 MIR4255-201ENST00000579351 72 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 AC024619.4-201ENST00000580924 316 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 MIR3199-1-201ENST00000582434 88 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.99□□□□□ -2.09
HOXA9P31269 AC022893.3-201ENST00000607665 437 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 DUSP12P1-201ENST00000612874 516 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 AL133173.2-201ENST00000614270 90 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 AC091834.1-201ENST00000614543 472 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms