Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MTCO3P5-201ENST00000433620 714 ntBASIC1.12□□□□□ -2.23
CCL1P22362 AC004223.1-201ENST00000479840 271 ntBASIC1.12□□□□□ -2.23
CCL1P22362 AC079395.1-201ENST00000510981 262 ntBASIC1.12□□□□□ -2.23
CCL1P22362 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.12□□□□□ -2.23
CCL1P22362 AL161670.1-201ENST00000554348 137 ntBASIC1.12□□□□□ -2.23
CCL1P22362 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.12□□□□□ -2.23
CCL1P22362 MIR4303-201ENST00000581299 66 ntBASIC1.12□□□□□ -2.23
CCL1P22362 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
CCL1P22362 BNIP3P30-201ENST00000601184 574 ntBASIC1.12□□□□□ -2.23
CCL1P22362 AC012065.4-201ENST00000602445 679 ntBASIC1.12□□□□□ -2.23
CCL1P22362 MIR8074-201ENST00000615081 81 ntBASIC1.12□□□□□ -2.23
CCL1P22362 FRG1KP-201ENST00000623592 341 ntBASIC1.12□□□□□ -2.23
CCL1P22362 ZNF209P-201ENST00000593450 2304 ntBASIC1.12□□□□□ -2.23
CCL1P22362 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CCL1P22362 AC092125.1-201ENST00000562568 1995 ntBASIC1.11□□□□□ -2.23
CCL1P22362 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CCL1P22362 RNU6-1210P-201ENST00000363775 107 ntBASIC1.11□□□□□ -2.23
CCL1P22362 Y_RNA.534-201ENST00000384599 112 ntBASIC1.11□□□□□ -2.23
CCL1P22362 RNU1-78P-201ENST00000391248 165 ntBASIC1.11□□□□□ -2.23
CCL1P22362 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.11□□□□□ -2.23
CCL1P22362 CBX3P9-201ENST00000402326 552 ntBASIC1.11□□□□□ -2.23
CCL1P22362 RNU6-1025P-201ENST00000410629 104 ntBASIC1.11□□□□□ -2.23
CCL1P22362 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.11□□□□□ -2.23
CCL1P22362 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.11□□□□□ -2.23
CCL1P22362 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.11□□□□□ -2.23
CCL1P22362 AL121890.1-201ENST00000435457 205 ntBASIC1.11□□□□□ -2.23
CCL1P22362 AC010095.1-201ENST00000443543 144 ntBASIC1.11□□□□□ -2.23
CCL1P22362 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.11□□□□□ -2.23
CCL1P22362 PTENP1-201ENST00000447117 1215 ntBASIC1.11□□□□□ -2.23
CCL1P22362 HSPE1P24-201ENST00000450782 238 ntBASIC1.11□□□□□ -2.23
CCL1P22362 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.11□□□□□ -2.23
CCL1P22362 SNORD97-201ENST00000459187 142 ntBASIC1.11□□□□□ -2.23
CCL1P22362 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.11□□□□□ -2.23
CCL1P22362 RNU6-548P-201ENST00000517083 115 ntBASIC1.11□□□□□ -2.23
CCL1P22362 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.11□□□□□ -2.23
CCL1P22362 AP000907.2-201ENST00000530827 353 ntBASIC1.11□□□□□ -2.23
CCL1P22362 CR383656.8-201ENST00000549046 145 ntBASIC1.11□□□□□ -2.23
CCL1P22362 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.11□□□□□ -2.23
CCL1P22362 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.11□□□□□ -2.23
CCL1P22362 TRAV32-201ENST00000553993 340 ntBASIC1.11□□□□□ -2.23
CCL1P22362 AL157871.3-201ENST00000557231 293 ntBASIC1.11□□□□□ -2.23
CCL1P22362 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.11□□□□□ -2.23
CCL1P22362 MIR1273C-201ENST00000578669 77 ntBASIC1.11□□□□□ -2.23
CCL1P22362 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.11□□□□□ -2.23
CCL1P22362 AL596327.1-201ENST00000603629 213 ntBASIC1.11□□□□□ -2.23
CCL1P22362 AC007363.1-201ENST00000604736 620 ntBASIC1.11□□□□□ -2.23
CCL1P22362 PRR13P7-201ENST00000605538 430 ntBASIC1.11□□□□□ -2.23
CCL1P22362 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.11□□□□□ -2.23
CCL1P22362 AC097468.3-201ENST00000607956 456 ntBASIC1.11□□□□□ -2.23
CCL1P22362 AC012360.2-201ENST00000609349 391 ntBASIC1.11□□□□□ -2.23
CCL1P22362 RNU6-1192P-201ENST00000612197 107 ntBASIC1.11□□□□□ -2.23
CCL1P22362 AL365204.3-201ENST00000612448 685 ntBASIC1.11□□□□□ -2.23
CCL1P22362 RNU6-489P-201ENST00000618289 107 ntBASIC1.11□□□□□ -2.23
CCL1P22362 MTND5P42-201ENST00000637720 498 ntBASIC1.11□□□□□ -2.23
CCL1P22362 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CCL1P22362 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
CCL1P22362 Y_RNA.33-201ENST00000362591 102 ntBASIC1.1□□□□□ -2.23
CCL1P22362 RNU6-395P-201ENST00000365662 106 ntBASIC1.1□□□□□ -2.23
CCL1P22362 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CCL1P22362 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CCL1P22362 SNORA40.6-201ENST00000391153 128 ntBASIC1.1□□□□□ -2.23
CCL1P22362 BTF3L4P2-201ENST00000392798 346 ntBASIC1.1□□□□□ -2.23
CCL1P22362 MIR1305-201ENST00000408300 86 ntBASIC1.1□□□□□ -2.23
CCL1P22362 RNU6-955P-201ENST00000410497 104 ntBASIC1.1□□□□□ -2.23
CCL1P22362 RNA5SP100-201ENST00000410903 110 ntBASIC1.1□□□□□ -2.23
CCL1P22362 RNA5SP59-201ENST00000410922 110 ntBASIC1.1□□□□□ -2.23
CCL1P22362 UBE2V1P10-201ENST00000414685 269 ntBASIC1.1□□□□□ -2.23
CCL1P22362 NCOR1P3-201ENST00000420479 303 ntBASIC1.1□□□□□ -2.23
CCL1P22362 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.1□□□□□ -2.23
CCL1P22362 HMGB1P31-201ENST00000437242 427 ntBASIC1.1□□□□□ -2.23
CCL1P22362 AC118469.1-201ENST00000442943 488 ntBASIC1.1□□□□□ -2.23
CCL1P22362 AC007327.1-201ENST00000447461 264 ntBASIC1.1□□□□□ -2.23
CCL1P22362 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.1□□□□□ -2.23
CCL1P22362 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.1□□□□□ -2.23
CCL1P22362 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.1□□□□□ -2.23
CCL1P22362 AL121594.1-201ENST00000475906 575 ntBASIC1.1□□□□□ -2.23
CCL1P22362 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.1□□□□□ -2.23
CCL1P22362 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.1□□□□□ -2.23
CCL1P22362 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.1□□□□□ -2.23
CCL1P22362 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.1□□□□□ -2.23
CCL1P22362 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.1□□□□□ -2.23
CCL1P22362 AC174048.1-201ENST00000603389 144 ntBASIC1.1□□□□□ -2.23
CCL1P22362 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CCL1P22362 Z82243.1-201ENST00000609432 473 ntBASIC1.1□□□□□ -2.23
CCL1P22362 AC004908.3-201ENST00000610248 625 ntBASIC1.1□□□□□ -2.23
CCL1P22362 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.1□□□□□ -2.23
CCL1P22362 AC021755.4-201ENST00000616620 456 ntBASIC1.1□□□□□ -2.23
CCL1P22362 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.1□□□□□ -2.23
CCL1P22362 AC126544.2-201ENST00000625174 749 ntBASIC1.1□□□□□ -2.23
CCL1P22362 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CCL1P22362 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.09□□□□□ -2.23
CCL1P22362 RNU6-413P-201ENST00000384115 107 ntBASIC1.09□□□□□ -2.23
CCL1P22362 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.09□□□□□ -2.23
CCL1P22362 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.09□□□□□ -2.23
CCL1P22362 MTCO3P46-201ENST00000425787 232 ntBASIC1.09□□□□□ -2.23
CCL1P22362 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.09□□□□□ -2.23
CCL1P22362 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.09□□□□□ -2.23
CCL1P22362 AL035666.1-201ENST00000446195 348 ntBASIC1.09□□□□□ -2.23
CCL1P22362 AL590365.1-201ENST00000450788 243 ntBASIC1.09□□□□□ -2.23
CCL1P22362 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms