Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 NDUFB4P4-201ENST00000404822 243 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 RNU4-55P-201ENST00000410731 137 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 RNU2-63P-201ENST00000410792 194 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 AC074117.2-201ENST00000417130 397 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 AC025750.2-201ENST00000442609 450 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFAIP3P21580 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFAIP3P21580 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFAIP3P21580 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.92□□□□□ -1.94
TNFAIP3P21580 AC090096.1-201ENST00000489168 390 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFAIP3P21580 Y_RNA.655-201ENST00000515919 96 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFAIP3P21580 AP003392.2-201ENST00000527269 208 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFAIP3P21580 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.92□□□□□ -1.94
TNFAIP3P21580 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.92□□□□□ -1.94
TNFAIP3P21580 BNIP3P6-201ENST00000549284 499 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 AL133241.1-201ENST00000556832 487 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 AC105137.2-201ENST00000569073 466 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 MTND1P15-201ENST00000579262 949 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 AL627309.6-201ENST00000606857 840 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 AC135507.2-201ENST00000612443 309 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 HMGB1P24-202ENST00000615653 685 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 U4atac.1-201ENST00000618345 95 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 AP003400.5-201ENST00000624827 617 ntBASIC2.92□□□□□ -1.94
TNFAIP3P21580 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.92□□□□□ -1.94
TNFAIP3P21580 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.92□□□□□ -1.94
TNFAIP3P21580 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
TNFAIP3P21580 Y_RNA.324-201ENST00000365165 102 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 RNU5E-7P-201ENST00000365290 117 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 Y_RNA.481-201ENST00000384373 102 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 RNU1-57P-201ENST00000384491 166 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 RNU6-1127P-201ENST00000384580 107 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 RNU2-16P-201ENST00000410712 136 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 UBE2V1P10-201ENST00000414685 269 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 AC138623.1-201ENST00000418060 216 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.91□□□□□ -1.94
TNFAIP3P21580 AL139281.1-201ENST00000422120 335 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 EIF4EP4-201ENST00000424916 578 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.91□□□□□ -1.94
TNFAIP3P21580 AC236972.1-201ENST00000433225 199 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFAIP3P21580 MRPL50P4-201ENST00000446432 475 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 SCARNA18-201ENST00000459004 134 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 AC133134.1-201ENST00000466800 359 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.91□□□□□ -1.94
TNFAIP3P21580 SMURF2P1-201ENST00000514992 481 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 AC109479.2-201ENST00000517842 174 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFAIP3P21580 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFAIP3P21580 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.91□□□□□ -1.94
TNFAIP3P21580 ELOCP31-201ENST00000540463 467 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TNFAIP3P21580 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFAIP3P21580 AC009063.1-201ENST00000563342 702 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFAIP3P21580 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 AC104073.3-201ENST00000610942 955 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 Z99129.1-201ENST00000612510 255 ntBASIC2.91□□□□□ -1.94
TNFAIP3P21580 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TNFAIP3P21580 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.9□□□□□ -1.95
TNFAIP3P21580 RNU6-552P-201ENST00000362869 119 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 RNU6-259P-201ENST00000383999 107 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 SNORD70.1-201ENST00000391007 85 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFAIP3P21580 TIMM9P3-201ENST00000428659 274 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 AC112220.1-201ENST00000434628 355 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 HMGB1P31-201ENST00000437242 427 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 AL135938.1-201ENST00000443141 297 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 PRPS1P1-201ENST00000445305 876 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 AC027673.1-201ENST00000456245 405 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 TPTE2P5-203ENST00000458118 728 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 RPS27AP9-201ENST00000477681 438 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 RNU2-69P-201ENST00000516061 100 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 SNORA31.23-201ENST00000517219 133 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 CKS1BP7-201ENST00000522230 235 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFAIP3P21580 AC073410.2-201ENST00000603240 332 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 AC093732.2-201ENST00000607950 274 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 Z82243.1-201ENST00000609432 473 ntBASIC2.9□□□□□ -1.95
TNFAIP3P21580 MTND5P26-201ENST00000426018 1752 ntBASIC2.89□□□□□ -1.95
TNFAIP3P21580 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFAIP3P21580 RNU6-529P-201ENST00000363383 104 ntBASIC2.89□□□□□ -1.95
TNFAIP3P21580 HMGN2P35-201ENST00000412164 270 ntBASIC2.89□□□□□ -1.95
TNFAIP3P21580 NUP35P1-201ENST00000422734 947 ntBASIC2.89□□□□□ -1.95
TNFAIP3P21580 SUMO1P4-201ENST00000429430 302 ntBASIC2.89□□□□□ -1.95
TNFAIP3P21580 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.89□□□□□ -1.95
TNFAIP3P21580 AL451074.3-201ENST00000437709 472 ntBASIC2.89□□□□□ -1.95
TNFAIP3P21580 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFAIP3P21580 AP001486.1-201ENST00000463339 476 ntBASIC2.89□□□□□ -1.95
TNFAIP3P21580 AL163973.1-201ENST00000484753 577 ntBASIC2.89□□□□□ -1.95
TNFAIP3P21580 MTCYBP40-201ENST00000509390 1135 ntBASIC2.89□□□□□ -1.95
TNFAIP3P21580 AC098799.2-201ENST00000509466 868 ntBASIC2.89□□□□□ -1.95
TNFAIP3P21580 AF213884.2-201ENST00000510417 903 ntBASIC2.89□□□□□ -1.95
TNFAIP3P21580 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.89□□□□□ -1.95
TNFAIP3P21580 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFAIP3P21580 MTATP6P3-201ENST00000581686 676 ntBASIC2.89□□□□□ -1.95
TNFAIP3P21580 AC008752.3-201ENST00000588113 712 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms