Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU6-1197P-201ENST00000391183 107 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.33□□□□□ -2.46
TOP2AP11388 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.33□□□□□ -2.46
TOP2AP11388 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.33□□□□□ -2.46
TOP2AP11388 SNORA68.3-201ENST00000515906 83 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 AC022616.8-201ENST00000533569 253 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 AL158211.1-201ENST00000566763 763 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 ANKRD36BP2-206ENST00000575193 1245 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 AC115085.1-201ENST00000588924 229 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
TOP2AP11388 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
TOP2AP11388 MIRLET7D-201ENST00000362263 87 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 MIR302D-201ENST00000362275 68 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 SNORD3E-201ENST00000362899 217 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 RNU6-833P-201ENST00000363486 107 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 RNU11-3P-201ENST00000391111 133 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.34□□□□□ -2.46
TOP2AP11388 AC007742.1-201ENST00000425789 329 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 C1DP1-201ENST00000426049 402 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 ELOCP26-201ENST00000436067 329 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 AC245047.7-201ENST00000440265 293 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 RNU7-27P-201ENST00000459281 62 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.34□□□□□ -2.46
TOP2AP11388 AC093027.1-201ENST00000546698 429 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 AC090888.2-201ENST00000559765 1144 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 AC073410.2-201ENST00000603240 332 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 AL356157.2-201ENST00000605122 111 ntBASIC-0.34□□□□□ -2.46
TOP2AP11388 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.47
TOP2AP11388 RNU6-263P-201ENST00000363811 107 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 RNU4-48P-201ENST00000365559 182 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 MIR320B1-201ENST00000390209 79 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
TOP2AP11388 CALM2P3-201ENST00000400429 449 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 MIR1267-201ENST00000408723 78 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 RNA5SP501-201ENST00000410990 112 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 EIF1P1-201ENST00000421436 341 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
TOP2AP11388 AL049874.1-201ENST00000489560 388 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 RNU6ATAC13P-201ENST00000516152 131 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 RN7SKP12-201ENST00000516275 143 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 POC1B-211ENST00000549504 581 ntTSL 5 BASIC-0.35□□□□□ -2.47
TOP2AP11388 AC026371.1-201ENST00000551867 419 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 AC068790.6-201ENST00000602558 258 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 MZT1P2-201ENST00000604387 248 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 AC073308.1-201ENST00000623696 305 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.35□□□□□ -2.47
TOP2AP11388 Z75746.1-201ENST00000440243 2080 ntBASIC-0.35□□□□□ -2.47
TOP2AP11388 AL391994.1-201ENST00000254724 282 ntBASIC-0.36□□□□□ -2.47
TOP2AP11388 RNU6-43P-201ENST00000384302 107 ntBASIC-0.36□□□□□ -2.47
TOP2AP11388 RNA5SP496-201ENST00000391240 109 ntBASIC-0.36□□□□□ -2.47
TOP2AP11388 AL161788.1-201ENST00000441805 169 ntBASIC-0.36□□□□□ -2.47
TOP2AP11388 FCF1P6-201ENST00000456841 595 ntBASIC-0.36□□□□□ -2.47
TOP2AP11388 snoU13.7-201ENST00000459220 104 ntBASIC-0.36□□□□□ -2.47
TOP2AP11388 HMGB1P29-201ENST00000505659 499 ntBASIC-0.36□□□□□ -2.47
TOP2AP11388 AC125611.1-201ENST00000549563 229 ntBASIC-0.36□□□□□ -2.47
TOP2AP11388 MTCYBP27-201ENST00000555160 670 ntBASIC-0.36□□□□□ -2.47
TOP2AP11388 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.36□□□□□ -2.47
TOP2AP11388 AC002545.1-201ENST00000592511 181 ntBASIC-0.36□□□□□ -2.47
TOP2AP11388 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.36□□□□□ -2.47
TOP2AP11388 uc_338.6-201ENST00000613544 171 ntBASIC-0.36□□□□□ -2.47
TOP2AP11388 uc_338.34-201ENST00000617467 174 ntBASIC-0.36□□□□□ -2.47
TOP2AP11388 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
TOP2AP11388 SNORD114-9-201ENST00000364370 72 ntBASIC-0.37□□□□□ -2.47
TOP2AP11388 RNA5SP240-201ENST00000365355 128 ntBASIC-0.37□□□□□ -2.47
TOP2AP11388 AC008562.1-201ENST00000521763 330 ntBASIC-0.37□□□□□ -2.47
TOP2AP11388 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC-0.37□□□□□ -2.47
TOP2AP11388 MED28P6-201ENST00000558776 231 ntBASIC-0.37□□□□□ -2.47
TOP2AP11388 MIR4290-201ENST00000583807 95 ntBASIC-0.37□□□□□ -2.47
TOP2AP11388 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.37□□□□□ -2.47
TOP2AP11388 RNU4-5P-201ENST00000607255 135 ntBASIC-0.37□□□□□ -2.47
TOP2AP11388 MIR409-201ENST00000362237 79 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 RNU6-30P-201ENST00000384561 107 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 BX664727.1-201ENST00000416024 466 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.38□□□□□ -2.47
TOP2AP11388 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
TOP2AP11388 AP003392.2-201ENST00000527269 208 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.38□□□□□ -2.47
TOP2AP11388 AC025423.5-201ENST00000550230 219 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 AC105129.3-201ENST00000605455 485 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 AL353765.1-201ENST00000605514 183 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 AL132822.1-201ENST00000617063 513 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 SNORD114-28-201ENST00000363610 72 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 RN7SKP142-201ENST00000411236 328 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 AC098592.2-201ENST00000413158 265 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 MTCO3P4-201ENST00000419236 787 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC-0.38□□□□□ -2.47
TOP2AP11388 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.38□□□□□ -2.47
TOP2AP11388 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
TOP2AP11388 SNRPGP17-201ENST00000603780 214 ntBASIC-0.38□□□□□ -2.47
TOP2AP11388 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.38□□□□□ -2.47
TOP2AP11388 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.38□□□□□ -2.47
TOP2AP11388 RNA5SP258-201ENST00000362750 119 ntBASIC-0.39□□□□□ -2.47
TOP2AP11388 DDX3P2-201ENST00000446138 111 ntBASIC-0.39□□□□□ -2.47
TOP2AP11388 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC-0.39□□□□□ -2.47
TOP2AP11388 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC-0.39□□□□□ -2.47
TOP2AP11388 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC-0.39□□□□□ -2.47
TOP2AP11388 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.39□□□□□ -2.47
TOP2AP11388 SNORA70.16-201ENST00000516390 95 ntBASIC-0.39□□□□□ -2.47
TOP2AP11388 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms