Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TEX21P-201ENST00000447107 1476 ntBASIC2.24□□□□□ -2.05
TOP1P11387 NACAP2-201ENST00000318548 624 ntBASIC2.23□□□□□ -2.05
TOP1P11387 RNA5SP240-201ENST00000365355 128 ntBASIC2.23□□□□□ -2.05
TOP1P11387 RNU6-658P-201ENST00000384606 106 ntBASIC2.23□□□□□ -2.05
TOP1P11387 SNORA40.3-201ENST00000390964 122 ntBASIC2.23□□□□□ -2.05
TOP1P11387 DEFB108C-201ENST00000400154 252 ntBASIC2.23□□□□□ -2.05
TOP1P11387 AL139397.2-201ENST00000404529 772 ntBASIC2.23□□□□□ -2.05
TOP1P11387 RPS3AP3-201ENST00000411933 242 ntBASIC2.23□□□□□ -2.05
TOP1P11387 HMGN1P14-201ENST00000412459 517 ntBASIC2.23□□□□□ -2.05
TOP1P11387 RPL36AP53-201ENST00000432891 316 ntBASIC2.23□□□□□ -2.05
TOP1P11387 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.23□□□□□ -2.05
TOP1P11387 TIMM9P1-201ENST00000436122 256 ntBASIC2.23□□□□□ -2.05
TOP1P11387 MTATP6P30-201ENST00000443540 664 ntBASIC2.23□□□□□ -2.05
TOP1P11387 ELOCP30-201ENST00000447108 299 ntBASIC2.23□□□□□ -2.05
TOP1P11387 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.23□□□□□ -2.05
TOP1P11387 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.23□□□□□ -2.05
TOP1P11387 AP001324.2-201ENST00000461163 319 ntBASIC2.23□□□□□ -2.05
TOP1P11387 RPL23AP42-201ENST00000471152 471 ntBASIC2.23□□□□□ -2.05
TOP1P11387 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.23□□□□□ -2.05
TOP1P11387 MTCO3P28-201ENST00000513351 515 ntBASIC2.23□□□□□ -2.05
TOP1P11387 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.23□□□□□ -2.05
TOP1P11387 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.23□□□□□ -2.05
TOP1P11387 OR11H5P-201ENST00000554039 926 ntBASIC2.23□□□□□ -2.05
TOP1P11387 MIR3126-201ENST00000577443 74 ntBASIC2.23□□□□□ -2.05
TOP1P11387 MIR4529-201ENST00000578110 78 ntBASIC2.23□□□□□ -2.05
TOP1P11387 MIR4293-201ENST00000584305 78 ntBASIC2.23□□□□□ -2.05
TOP1P11387 AC068790.3-201ENST00000602988 553 ntBASIC2.23□□□□□ -2.05
TOP1P11387 AC004908.2-201ENST00000609090 574 ntBASIC2.23□□□□□ -2.05
TOP1P11387 MIR5739-201ENST00000619803 80 ntBASIC2.23□□□□□ -2.05
TOP1P11387 SDR42E1P4-201ENST00000620894 481 ntBASIC2.23□□□□□ -2.05
TOP1P11387 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
TOP1P11387 AL359851.1-201ENST00000569460 4997 ntBASIC2.22□□□□□ -2.05
TOP1P11387 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TOP1P11387 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TOP1P11387 U8.3-201ENST00000363321 132 ntBASIC2.22□□□□□ -2.05
TOP1P11387 Y_RNA.201-201ENST00000364052 96 ntBASIC2.22□□□□□ -2.05
TOP1P11387 RNU4-24P-201ENST00000364565 139 ntBASIC2.22□□□□□ -2.05
TOP1P11387 MIR583-201ENST00000384846 75 ntBASIC2.22□□□□□ -2.05
TOP1P11387 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
TOP1P11387 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.22□□□□□ -2.05
TOP1P11387 CDK8P2-201ENST00000415020 547 ntBASIC2.22□□□□□ -2.05
TOP1P11387 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.22□□□□□ -2.05
TOP1P11387 MTCO2P34-201ENST00000421994 607 ntBASIC2.22□□□□□ -2.05
TOP1P11387 AL445685.2-201ENST00000422551 342 ntBASIC2.22□□□□□ -2.05
TOP1P11387 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.22□□□□□ -2.05
TOP1P11387 AC009961.2-201ENST00000435771 251 ntBASIC2.22□□□□□ -2.05
TOP1P11387 RPS24P1-201ENST00000438550 371 ntBASIC2.22□□□□□ -2.05
TOP1P11387 RPL22P17-201ENST00000438729 315 ntBASIC2.22□□□□□ -2.05
TOP1P11387 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.22□□□□□ -2.05
TOP1P11387 KATNBL1P3-201ENST00000443475 909 ntBASIC2.22□□□□□ -2.05
TOP1P11387 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.22□□□□□ -2.05
TOP1P11387 GAPDHP17-201ENST00000449858 1001 ntBASIC2.22□□□□□ -2.05
TOP1P11387 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.22□□□□□ -2.05
TOP1P11387 RNU6-956P-201ENST00000458868 103 ntBASIC2.22□□□□□ -2.05
TOP1P11387 AC117503.1-201ENST00000472241 394 ntBASIC2.22□□□□□ -2.05
TOP1P11387 MTND1P3-201ENST00000484956 952 ntBASIC2.22□□□□□ -2.05
TOP1P11387 AC018437.1-201ENST00000492214 406 ntBASIC2.22□□□□□ -2.05
TOP1P11387 ARL2BPP4-201ENST00000506854 471 ntBASIC2.22□□□□□ -2.05
TOP1P11387 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.22□□□□□ -2.05
TOP1P11387 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TOP1P11387 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.22□□□□□ -2.05
TOP1P11387 RNU6-295P-201ENST00000516901 104 ntBASIC2.22□□□□□ -2.05
TOP1P11387 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
TOP1P11387 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.22□□□□□ -2.05
TOP1P11387 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.22□□□□□ -2.05
TOP1P11387 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.22□□□□□ -2.05
TOP1P11387 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.22□□□□□ -2.05
TOP1P11387 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.22□□□□□ -2.05
TOP1P11387 MIR4528-201ENST00000577763 90 ntBASIC2.22□□□□□ -2.05
TOP1P11387 BNIP3P8-201ENST00000597863 560 ntBASIC2.22□□□□□ -2.05
TOP1P11387 RNU6-87P-201ENST00000607561 108 ntBASIC2.22□□□□□ -2.05
TOP1P11387 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.22□□□□□ -2.05
TOP1P11387 AC009233.1-201ENST00000616477 371 ntBASIC2.22□□□□□ -2.05
TOP1P11387 AL136313.1-201ENST00000624804 202 ntBASIC2.22□□□□□ -2.05
TOP1P11387 AP006437.1-201ENST00000641440 3685 ntBASIC2.22□□□□□ -2.05
TOP1P11387 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
TOP1P11387 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.21□□□□□ -2.06
TOP1P11387 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
TOP1P11387 RNU5A-8P-201ENST00000364102 114 ntBASIC2.21□□□□□ -2.06
TOP1P11387 RNY4P16-201ENST00000364768 94 ntBASIC2.21□□□□□ -2.06
TOP1P11387 Y_RNA.359-201ENST00000365498 102 ntBASIC2.21□□□□□ -2.06
TOP1P11387 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.21□□□□□ -2.06
TOP1P11387 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.21□□□□□ -2.06
TOP1P11387 Y_RNA.436-201ENST00000384097 102 ntBASIC2.21□□□□□ -2.06
TOP1P11387 RNU6-748P-201ENST00000384648 107 ntBASIC2.21□□□□□ -2.06
TOP1P11387 SUMO2P12-201ENST00000405924 140 ntBASIC2.21□□□□□ -2.06
TOP1P11387 RNU2-20P-201ENST00000410425 191 ntBASIC2.21□□□□□ -2.06
TOP1P11387 RNU2-40P-201ENST00000410833 196 ntBASIC2.21□□□□□ -2.06
TOP1P11387 EDDM3CP-201ENST00000415977 425 ntBASIC2.21□□□□□ -2.06
TOP1P11387 EIF1AXP1-201ENST00000419267 435 ntBASIC2.21□□□□□ -2.06
TOP1P11387 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.21□□□□□ -2.06
TOP1P11387 AC097463.2-201ENST00000421074 142 ntBASIC2.21□□□□□ -2.06
TOP1P11387 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.21□□□□□ -2.06
TOP1P11387 AL589823.1-201ENST00000429577 183 ntBASIC2.21□□□□□ -2.06
TOP1P11387 DLGAP5P1-201ENST00000430307 464 ntBASIC2.21□□□□□ -2.06
TOP1P11387 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.21□□□□□ -2.06
TOP1P11387 AC005094.1-201ENST00000440420 368 ntBASIC2.21□□□□□ -2.06
TOP1P11387 SSXP1-201ENST00000453640 473 ntBASIC2.21□□□□□ -2.06
TOP1P11387 AL033528.1-201ENST00000453780 140 ntBASIC2.21□□□□□ -2.06
TOP1P11387 CYP2C59P-201ENST00000457790 269 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms