Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CSB-PGBD3P0DP91 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-50P-201ENST00000362356 103 ntBASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 SNORD50B-201ENST00000364995 70 ntBASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-1081P-201ENST00000384537 107 ntBASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 RPS29P13-201ENST00000402041 169 ntBASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 AL445433.1-201ENST00000457507 257 ntBASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 RN7SKP46-201ENST00000515942 234 ntBASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 SNORA31.19-201ENST00000517079 126 ntBASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 MIR3200-201ENST00000580767 85 ntBASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 AC136601.2-201ENST00000604356 474 ntBASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 U6.92-201ENST00000636464 89 ntBASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSB-PGBD3P0DP91 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 Y_RNA.122-201ENST00000363331 96 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 RNA5SP399-201ENST00000364003 117 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 MIR10A-201ENST00000385043 110 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 MIR613-201ENST00000385248 95 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 MIR325-201ENST00000385260 98 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-1197P-201ENST00000391183 107 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 SNORA40C-201ENST00000391285 128 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 RNA5SP129-201ENST00000410276 118 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 AL035423.1-201ENST00000420331 213 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 AC007560.1-201ENST00000426912 237 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 AL451050.1-201ENST00000450126 415 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 AC022559.1-201ENST00000520905 205 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 AC093023.1-201ENST00000547375 507 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 AC008962.1-201ENST00000605729 304 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 U2.14-201ENST00000615943 113 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 AC099506.2-201ENST00000623074 221 ntBASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CSB-PGBD3P0DP91 LINC02555-201ENST00000563933 1951 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 AC092435.4-201ENST00000623012 4159 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 Y_RNA.143-201ENST00000363520 106 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 RNU6-740P-201ENST00000364734 105 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 Y_RNA.439-201ENST00000384119 94 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 FTH1P6-201ENST00000430768 320 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 AL445305.1-201ENST00000432577 575 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 ANP32BP2-201ENST00000454525 545 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 AC104619.4-201ENST00000510773 249 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 SNORA74D-201ENST00000516404 141 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 RNU6-572P-201ENST00000516724 80 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 YPEL5P3-201ENST00000547227 352 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 SYF2P1-201ENST00000550658 413 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 AL645944.1-201ENST00000603857 493 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 AP000787.2-201ENST00000604432 568 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 LINC00901.1-201ENST00000617252 152 ntBASIC5.27□□□□□ -1.57
CSB-PGBD3P0DP91 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 HAUS6P2-201ENST00000433254 2404 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 AL133412.1-201ENST00000380194 2992 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 RNU6-47P-201ENST00000383866 107 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 Y_RNA.581-201ENST00000391017 97 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 RNU2-20P-201ENST00000410425 191 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 RN7SKP51-201ENST00000410781 304 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 SNRPEP9-201ENST00000436794 238 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 AC133134.1-201ENST00000466800 359 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 UBE2CP3-201ENST00000502715 450 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 RNA5SP468-201ENST00000516782 93 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 HMGB1P14-201ENST00000557424 591 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms