Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1□□□□□ -2.25
UBBP0CG47 AL691447.3-201ENST00000635020 330 ntBASIC1□□□□□ -2.25
UBBP0CG47 MTND5P42-201ENST00000637720 498 ntBASIC1□□□□□ -2.25
UBBP0CG47 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
UBBP0CG47 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1□□□□□ -2.25
UBBP0CG47 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
UBBP0CG47 RBBP8P1-201ENST00000449447 1844 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 FARSBP1-201ENST00000435808 1778 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.99□□□□□ -2.25
UBBP0CG47 RNU6-701P-201ENST00000384059 107 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 RNU6-611P-201ENST00000384276 104 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 SNORD14D-201ENST00000384390 87 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 ERHP2-201ENST00000402323 299 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 FCF1P10-201ENST00000407590 479 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 RNU2-36P-201ENST00000410361 191 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 RPS12P24-201ENST00000412619 387 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 AC016831.2-201ENST00000417179 352 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 MRPL35P3-201ENST00000421557 364 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.99□□□□□ -2.25
UBBP0CG47 USP9YP35-201ENST00000435696 412 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 AL078601.1-201ENST00000444542 271 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 PAXBP1P1-201ENST00000449315 447 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.99□□□□□ -2.25
UBBP0CG47 snoU13.26-201ENST00000459452 105 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 MED28P2-201ENST00000475771 317 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 RNU6-1315P-201ENST00000517187 99 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.99□□□□□ -2.25
UBBP0CG47 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.99□□□□□ -2.25
UBBP0CG47 AC018630.3-201ENST00000542637 96 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 AC073410.2-201ENST00000603240 332 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 AC010900.2-201ENST00000604508 210 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 AL158211.2-201ENST00000607282 395 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 Z82243.1-201ENST00000609432 473 ntBASIC0.99□□□□□ -2.25
UBBP0CG47 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.98□□□□□ -2.25
UBBP0CG47 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
UBBP0CG47 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
UBBP0CG47 RNU6-661P-201ENST00000362409 107 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 RNU5E-1-201ENST00000362477 120 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 RNU6-487P-201ENST00000365430 104 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 SMIM11P1-201ENST00000369586 178 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 RNU6-622P-201ENST00000384272 103 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.98□□□□□ -2.25
UBBP0CG47 MTCO3P5-201ENST00000433620 714 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 NEFMP1-201ENST00000443423 1006 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 BTF3P15-201ENST00000455606 336 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.98□□□□□ -2.25
UBBP0CG47 SNORA59A-201ENST00000459326 152 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 RPL37P6-201ENST00000460682 294 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 MTND1P16-201ENST00000465177 898 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 AC005908.1-201ENST00000468701 347 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.98□□□□□ -2.25
UBBP0CG47 AP001025.1-201ENST00000486139 332 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 AC132942.1-201ENST00000486753 483 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 RPL36AP21-201ENST00000490372 323 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 MTCYBP43-201ENST00000513621 740 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 RNA5SP445-201ENST00000515889 115 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.98□□□□□ -2.25
UBBP0CG47 AC025678.1-201ENST00000567861 338 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.98□□□□□ -2.25
UBBP0CG47 MIR4303-201ENST00000581299 66 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 AL606834.3-201ENST00000602615 496 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 AC068620.3-201ENST00000602749 560 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 AC004987.4-201ENST00000603383 338 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 AC012360.2-201ENST00000609349 391 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 AC093788.1-201ENST00000609356 927 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 AC092574.1-201ENST00000609771 420 ntBASIC0.98□□□□□ -2.25
UBBP0CG47 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.98□□□□□ -2.25
UBBP0CG47 RNU6-462P-201ENST00000362659 105 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 SNORD115-3-201ENST00000363100 82 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 RNU6-944P-201ENST00000364023 107 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 SNORD14B-201ENST00000364533 90 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 SNORA4.3-201ENST00000365564 137 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 RNU6-769P-201ENST00000384407 104 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 RNU6-843P-201ENST00000384454 104 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 RNA5SP100-201ENST00000410903 110 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 RNA5SP59-201ENST00000410922 110 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 RN7SKP284-201ENST00000411002 343 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 USP9YP33-201ENST00000412220 421 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 MTCO2P20-201ENST00000437339 673 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 AC245517.4-201ENST00000448601 281 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 snoU13.14-201ENST00000459372 104 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 AL121594.1-201ENST00000475906 575 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 MTND1P3-201ENST00000484956 952 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 AC109927.2-201ENST00000506416 303 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 SUMO2P5-201ENST00000506790 245 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 RNU2-53P-201ENST00000516257 147 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 RNU6-902P-201ENST00000517212 91 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 AC109329.1-201ENST00000518744 317 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 MTND1P36-201ENST00000522384 936 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.97□□□□□ -2.25
UBBP0CG47 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.97□□□□□ -2.25
UBBP0CG47 RPL21P5-201ENST00000554662 472 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 AC019288.1-201ENST00000557918 224 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 AC005668.1-201ENST00000571142 476 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 MTCYBP33-201ENST00000575007 1130 ntBASIC0.97□□□□□ -2.25
UBBP0CG47 MIR3146-201ENST00000580367 79 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms