Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL669831.1-202ENST00000428504 417 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 NDUFA5P4-201ENST00000436704 385 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 GTF2IP13-201ENST00000438487 386 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 AL121871.1-201ENST00000443413 436 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXC6P09630 SNORD19B-201ENST00000459623 84 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 RPL21P41-201ENST00000459863 264 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 YWHAEP4-201ENST00000505390 198 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC6P09630 RNU6-189P-201ENST00000516120 101 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 RNU6-559P-201ENST00000516151 98 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 RNU6-566P-201ENST00000516790 107 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 RN7SKP258-201ENST00000517151 304 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.13□□□□□ -1.91
HOXC6P09630 AP000889.2-201ENST00000532684 490 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 AL163153.1-201ENST00000554223 283 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 MIR1302-2-201ENST00000607096 138 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 AC022893.3-201ENST00000607665 437 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 AC084781.2-201ENST00000615568 161 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 AC126177.8-201ENST00000618339 1015 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 MTND5P42-201ENST00000637720 498 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC6P09630 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC6P09630 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC6P09630 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC6P09630 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC6P09630 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC6P09630 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC6P09630 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC6P09630 SNORD113-7-201ENST00000363762 77 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 RNU6-190P-201ENST00000384154 102 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 RNU6-1013P-201ENST00000384180 107 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 SNORD116-29-201ENST00000384516 83 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 MIR548K-201ENST00000408406 116 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC6P09630 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXC6P09630 BMS1P22-201ENST00000414726 313 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 NCOR1P3-201ENST00000420479 303 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 AF228730.4-201ENST00000421457 183 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC6P09630 MTCYBP6-201ENST00000441810 138 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 AC087884.1-201ENST00000469738 328 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 AL049874.1-201ENST00000489560 388 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC6P09630 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
HOXC6P09630 MLLT10P2-201ENST00000506434 249 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 AC010265.1-201ENST00000513509 211 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC6P09630 AC096725.1-201ENST00000514266 313 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 SNORA31.3-201ENST00000516029 96 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 RNU6-256P-201ENST00000516747 97 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 ERHP1-201ENST00000523006 310 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 AC005034.5-201ENST00000604219 466 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 AL022345.1-201ENST00000607292 135 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 AC103705.1-201ENST00000619013 241 ntBASIC3.12□□□□□ -1.91
HOXC6P09630 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC6P09630 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXC6P09630 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HOXC6P09630 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
HOXC6P09630 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HOXC6P09630 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC6P09630 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC6P09630 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC6P09630 AL137003.2-201ENST00000606924 2538 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 MIR369-201ENST00000362155 70 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 SNORA63-201ENST00000363450 132 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 Y_RNA.326-201ENST00000365176 113 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC6P09630 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC6P09630 EIF4E2P1-201ENST00000393781 255 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 MIR450B-201ENST00000401182 78 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 MIR887-201ENST00000401258 79 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC6P09630 RPS12P24-201ENST00000412619 387 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 VN1R36P-201ENST00000414936 291 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.11□□□□□ -1.91
HOXC6P09630 AL353729.1-201ENST00000425044 720 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 SAR1AP4-201ENST00000429225 591 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC6P09630 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC6P09630 AL591212.2-201ENST00000433923 257 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 AC236972.2-201ENST00000434979 310 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 HMGN2P20-201ENST00000437531 273 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC6P09630 AC104472.2-201ENST00000469035 601 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC6P09630 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXC6P09630 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.11□□□□□ -1.91
HOXC6P09630 RN7SKP24-201ENST00000515888 284 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 RNU2-69P-201ENST00000516061 100 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 RNA5SP148-201ENST00000516527 94 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 RNU6-677P-201ENST00000516914 101 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 Y_RNA.718-201ENST00000517110 102 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 SNORA31.21-201ENST00000517180 77 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC6P09630 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXC6P09630 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXC6P09630 AC093249.1-201ENST00000567049 203 ntBASIC3.11□□□□□ -1.91
HOXC6P09630 MIR4790-201ENST00000577799 79 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms