Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.48□□□□□ -2.01
VIMP08670 RPL7P12-201ENST00000446719 750 ntBASIC2.48□□□□□ -2.01
VIMP08670 RPS29P26-201ENST00000477483 171 ntBASIC2.48□□□□□ -2.01
VIMP08670 AC018437.1-201ENST00000492214 406 ntBASIC2.48□□□□□ -2.01
VIMP08670 MTCO3P9-201ENST00000506989 781 ntBASIC2.48□□□□□ -2.01
VIMP08670 AC074344.1-201ENST00000512823 224 ntBASIC2.48□□□□□ -2.01
VIMP08670 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.48□□□□□ -2.01
VIMP08670 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VIMP08670 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.48□□□□□ -2.01
VIMP08670 LRRC37A5P-203ENST00000580181 585 ntBASIC2.48□□□□□ -2.01
VIMP08670 AL391646.1-201ENST00000603860 190 ntBASIC2.48□□□□□ -2.01
VIMP08670 MIR6840-201ENST00000611937 71 ntBASIC2.48□□□□□ -2.01
VIMP08670 AC026585.1-201ENST00000619582 524 ntBASIC2.48□□□□□ -2.01
VIMP08670 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.48□□□□□ -2.01
VIMP08670 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
VIMP08670 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
VIMP08670 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
VIMP08670 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VIMP08670 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
VIMP08670 OR4G2P-201ENST00000328113 903 ntBASIC2.47□□□□□ -2.01
VIMP08670 MIR21-201ENST00000362134 72 ntBASIC2.47□□□□□ -2.01
VIMP08670 RNA5SP125-201ENST00000364843 120 ntBASIC2.47□□□□□ -2.01
VIMP08670 Y_RNA.296-201ENST00000364930 108 ntBASIC2.47□□□□□ -2.01
VIMP08670 RNU6-1103P-201ENST00000384150 107 ntBASIC2.47□□□□□ -2.01
VIMP08670 RNU6-843P-201ENST00000384454 104 ntBASIC2.47□□□□□ -2.01
VIMP08670 SNORD116-20-201ENST00000384529 92 ntBASIC2.47□□□□□ -2.01
VIMP08670 Y_RNA.582-201ENST00000391023 95 ntBASIC2.47□□□□□ -2.01
VIMP08670 RNU6-1140P-201ENST00000410517 106 ntBASIC2.47□□□□□ -2.01
VIMP08670 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.47□□□□□ -2.01
VIMP08670 CYCSP33-201ENST00000414485 327 ntBASIC2.47□□□□□ -2.01
VIMP08670 CYCSP48-201ENST00000417124 323 ntBASIC2.47□□□□□ -2.01
VIMP08670 RPS3AP44-201ENST00000425466 790 ntBASIC2.47□□□□□ -2.01
VIMP08670 WARS2P1-201ENST00000429678 537 ntBASIC2.47□□□□□ -2.01
VIMP08670 AL451074.3-201ENST00000437709 472 ntBASIC2.47□□□□□ -2.01
VIMP08670 AC012308.1-201ENST00000451232 178 ntBASIC2.47□□□□□ -2.01
VIMP08670 DYNLL1P5-201ENST00000467158 270 ntBASIC2.47□□□□□ -2.01
VIMP08670 AC079804.2-201ENST00000490376 200 ntBASIC2.47□□□□□ -2.01
VIMP08670 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.47□□□□□ -2.01
VIMP08670 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.47□□□□□ -2.01
VIMP08670 CR383656.8-201ENST00000549046 145 ntBASIC2.47□□□□□ -2.01
VIMP08670 BNIP3P6-201ENST00000549284 499 ntBASIC2.47□□□□□ -2.01
VIMP08670 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.47□□□□□ -2.01
VIMP08670 AC008752.3-201ENST00000588113 712 ntBASIC2.47□□□□□ -2.01
VIMP08670 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.47□□□□□ -2.01
VIMP08670 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.47□□□□□ -2.01
VIMP08670 AL449363.1-201ENST00000617815 186 ntBASIC2.47□□□□□ -2.01
VIMP08670 MIR3529-201ENST00000637713 78 ntBASIC2.47□□□□□ -2.01
VIMP08670 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
VIMP08670 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
VIMP08670 AC006020.1-201ENST00000420179 1854 ntBASIC2.46□□□□□ -2.02
VIMP08670 MIRLET7G-201ENST00000362280 84 ntBASIC2.46□□□□□ -2.02
VIMP08670 SNORA38-201ENST00000363946 132 ntBASIC2.46□□□□□ -2.02
VIMP08670 RNU6-1303P-201ENST00000364841 107 ntBASIC2.46□□□□□ -2.02
VIMP08670 RNU5A-6P-201ENST00000384136 116 ntBASIC2.46□□□□□ -2.02
VIMP08670 AL591416.1-201ENST00000404015 867 ntBASIC2.46□□□□□ -2.02
VIMP08670 BTF3P7-201ENST00000407097 488 ntBASIC2.46□□□□□ -2.02
VIMP08670 RAP1BP3-201ENST00000407180 549 ntBASIC2.46□□□□□ -2.02
VIMP08670 UBE2V1P10-201ENST00000414685 269 ntBASIC2.46□□□□□ -2.02
VIMP08670 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.46□□□□□ -2.02
VIMP08670 AC002486.1-201ENST00000435098 391 ntBASIC2.46□□□□□ -2.02
VIMP08670 HMGB1P31-201ENST00000437242 427 ntBASIC2.46□□□□□ -2.02
VIMP08670 MTND1P29-201ENST00000448112 647 ntBASIC2.46□□□□□ -2.02
VIMP08670 AL356010.1-201ENST00000456364 102 ntBASIC2.46□□□□□ -2.02
VIMP08670 BX510359.1-201ENST00000456973 237 ntBASIC2.46□□□□□ -2.02
VIMP08670 RPS3AP14-201ENST00000483907 780 ntBASIC2.46□□□□□ -2.02
VIMP08670 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
VIMP08670 AC105417.1-201ENST00000514691 285 ntBASIC2.46□□□□□ -2.02
VIMP08670 SNORA43.2-201ENST00000516652 128 ntBASIC2.46□□□□□ -2.02
VIMP08670 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.46□□□□□ -2.02
VIMP08670 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.46□□□□□ -2.02
VIMP08670 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.46□□□□□ -2.02
VIMP08670 AP005435.4-201ENST00000529514 284 ntBASIC2.46□□□□□ -2.02
VIMP08670 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.46□□□□□ -2.02
VIMP08670 AC021646.1-201ENST00000605469 484 ntBASIC2.46□□□□□ -2.02
VIMP08670 AC245008.1-201ENST00000608123 476 ntBASIC2.46□□□□□ -2.02
VIMP08670 AC093788.1-201ENST00000609356 927 ntBASIC2.46□□□□□ -2.02
VIMP08670 AC007684.1-201ENST00000609671 477 ntBASIC2.46□□□□□ -2.02
VIMP08670 ATP5A1P2-202ENST00000616464 443 ntBASIC2.46□□□□□ -2.02
VIMP08670 AL031601.2-202ENST00000622650 282 ntBASIC2.46□□□□□ -2.02
VIMP08670 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
VIMP08670 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VIMP08670 ZNF720P1-201ENST00000562403 1939 ntBASIC2.46□□□□□ -2.02
VIMP08670 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.46□□□□□ -2.02
VIMP08670 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
VIMP08670 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
VIMP08670 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
VIMP08670 OR56A5-201ENST00000340110 738 ntBASIC2.45□□□□□ -2.02
VIMP08670 SNORD62.1-201ENST00000362541 86 ntBASIC2.45□□□□□ -2.02
VIMP08670 RNU1-72P-201ENST00000362976 153 ntBASIC2.45□□□□□ -2.02
VIMP08670 SNORA41-201ENST00000384675 132 ntBASIC2.45□□□□□ -2.02
VIMP08670 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
VIMP08670 RPS4XP8-201ENST00000402039 771 ntBASIC2.45□□□□□ -2.02
VIMP08670 AC138623.1-201ENST00000418060 216 ntBASIC2.45□□□□□ -2.02
VIMP08670 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.45□□□□□ -2.02
VIMP08670 MTCO2P19-201ENST00000427513 598 ntBASIC2.45□□□□□ -2.02
VIMP08670 AC236972.1-201ENST00000433225 199 ntBASIC2.45□□□□□ -2.02
VIMP08670 AC090515.1-201ENST00000465295 476 ntBASIC2.45□□□□□ -2.02
VIMP08670 AC140059.1-201ENST00000489238 361 ntBASIC2.45□□□□□ -2.02
VIMP08670 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.45□□□□□ -2.02
VIMP08670 AC108078.1-201ENST00000508073 725 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms