Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
THBS1P07996 AL391516.1-201ENST00000554380 2449 ntBASIC4.45□□□□□ -1.7
THBS1P07996 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
THBS1P07996 MFSD8-216ENST00000641147 4009 ntBASIC4.45□□□□□ -1.7
THBS1P07996 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.45□□□□□ -1.7
THBS1P07996 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.45□□□□□ -1.7
THBS1P07996 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.45□□□□□ -1.7
THBS1P07996 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
THBS1P07996 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
THBS1P07996 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
THBS1P07996 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
THBS1P07996 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
THBS1P07996 ZFRP1-201ENST00000457579 2970 ntBASIC4.44□□□□□ -1.7
THBS1P07996 SAMMSON-226ENST00000642089 1582 ntBASIC4.44□□□□□ -1.7
THBS1P07996 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
THBS1P07996 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
THBS1P07996 CUL1P1-201ENST00000509510 2425 ntBASIC4.44□□□□□ -1.7
THBS1P07996 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
THBS1P07996 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
THBS1P07996 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
THBS1P07996 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
THBS1P07996 RNU6-429P-201ENST00000384582 108 ntBASIC4.44□□□□□ -1.7
THBS1P07996 MIR518D-201ENST00000385014 87 ntBASIC4.44□□□□□ -1.7
THBS1P07996 MIR616-201ENST00000385293 97 ntBASIC4.44□□□□□ -1.7
THBS1P07996 U3.22-201ENST00000391120 215 ntBASIC4.44□□□□□ -1.7
THBS1P07996 ELOCP21-201ENST00000412558 336 ntBASIC4.44□□□□□ -1.7
THBS1P07996 AC114755.2-201ENST00000413520 361 ntBASIC4.44□□□□□ -1.7
THBS1P07996 AC074117.2-201ENST00000417130 397 ntBASIC4.44□□□□□ -1.7
THBS1P07996 AC009237.8-201ENST00000445492 379 ntBASIC4.44□□□□□ -1.7
THBS1P07996 AURKAPS2-201ENST00000454983 333 ntBASIC4.44□□□□□ -1.7
THBS1P07996 U8.19-201ENST00000459095 133 ntBASIC4.44□□□□□ -1.7
THBS1P07996 RPL23AP56-201ENST00000460778 453 ntBASIC4.44□□□□□ -1.7
THBS1P07996 AC007215.1-201ENST00000464893 276 ntBASIC4.44□□□□□ -1.7
THBS1P07996 SNRPGP7-201ENST00000469016 106 ntBASIC4.44□□□□□ -1.7
THBS1P07996 IGLV2-34-201ENST00000490007 283 ntBASIC4.44□□□□□ -1.7
THBS1P07996 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.44□□□□□ -1.7
THBS1P07996 AC091905.4-201ENST00000623432 202 ntBASIC4.44□□□□□ -1.7
THBS1P07996 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.44□□□□□ -1.7
THBS1P07996 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
THBS1P07996 TLK1P1-201ENST00000456760 2440 ntBASIC4.44□□□□□ -1.7
THBS1P07996 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
THBS1P07996 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
THBS1P07996 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
THBS1P07996 AC134026.1-201ENST00000623249 2239 ntBASIC4.44□□□□□ -1.7
THBS1P07996 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.43□□□□□ -1.7
THBS1P07996 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
THBS1P07996 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.43□□□□□ -1.7
THBS1P07996 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
THBS1P07996 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
THBS1P07996 MAPK10-286ENST00000641208 8747 ntBASIC4.43□□□□□ -1.7
THBS1P07996 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
THBS1P07996 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
THBS1P07996 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
THBS1P07996 RNU1-83P-201ENST00000363426 164 ntBASIC4.43□□□□□ -1.7
THBS1P07996 RNU6-324P-201ENST00000363957 106 ntBASIC4.43□□□□□ -1.7
THBS1P07996 Y_RNA.293-201ENST00000364908 93 ntBASIC4.43□□□□□ -1.7
THBS1P07996 MIR544A-201ENST00000384855 91 ntBASIC4.43□□□□□ -1.7
THBS1P07996 AL355497.1-201ENST00000406262 551 ntBASIC4.43□□□□□ -1.7
THBS1P07996 FAR2P2-201ENST00000413041 594 ntBASIC4.43□□□□□ -1.7
THBS1P07996 AC096649.2-201ENST00000416186 393 ntBASIC4.43□□□□□ -1.7
THBS1P07996 AC012306.1-201ENST00000423267 114 ntBASIC4.43□□□□□ -1.7
THBS1P07996 RPL21P66-201ENST00000426566 466 ntBASIC4.43□□□□□ -1.7
THBS1P07996 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.43□□□□□ -1.7
THBS1P07996 AC108751.2-201ENST00000469993 231 ntBASIC4.43□□□□□ -1.7
THBS1P07996 AC083982.1-201ENST00000485679 344 ntBASIC4.43□□□□□ -1.7
THBS1P07996 RNA5SP360-201ENST00000516555 118 ntBASIC4.43□□□□□ -1.7
THBS1P07996 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.43□□□□□ -1.7
THBS1P07996 MIR4458-201ENST00000578872 75 ntBASIC4.43□□□□□ -1.7
THBS1P07996 AL391261.4-201ENST00000616012 481 ntBASIC4.43□□□□□ -1.7
THBS1P07996 MIR6129-201ENST00000616087 109 ntBASIC4.43□□□□□ -1.7
THBS1P07996 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.43□□□□□ -1.7
THBS1P07996 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
THBS1P07996 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.43□□□□□ -1.7
THBS1P07996 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
THBS1P07996 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
THBS1P07996 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
THBS1P07996 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.43□□□□□ -1.7
THBS1P07996 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
THBS1P07996 OR51H2P-202ENST00000641424 3046 ntBASIC4.43□□□□□ -1.7
THBS1P07996 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.42□□□□□ -1.7
THBS1P07996 AC022893.2-201ENST00000564832 3296 ntBASIC4.42□□□□□ -1.7
THBS1P07996 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
THBS1P07996 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
THBS1P07996 RNU1-62P-201ENST00000362599 164 ntBASIC4.42□□□□□ -1.7
THBS1P07996 RNU6-1285P-201ENST00000363480 105 ntBASIC4.42□□□□□ -1.7
THBS1P07996 RN7SKP103-201ENST00000363848 320 ntBASIC4.42□□□□□ -1.7
THBS1P07996 snoU2_19.4-201ENST00000364329 80 ntBASIC4.42□□□□□ -1.7
THBS1P07996 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.42□□□□□ -1.7
THBS1P07996 RNU6-643P-201ENST00000384018 107 ntBASIC4.42□□□□□ -1.7
THBS1P07996 RPL26P27-201ENST00000414397 437 ntBASIC4.42□□□□□ -1.7
THBS1P07996 SALL4P2-201ENST00000423288 2910 ntBASIC4.42□□□□□ -1.7
THBS1P07996 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.42□□□□□ -1.7
THBS1P07996 RPL37P4-201ENST00000448908 268 ntBASIC4.42□□□□□ -1.7
THBS1P07996 RPS23P7-201ENST00000466210 444 ntBASIC4.42□□□□□ -1.7
THBS1P07996 RPL21P126-201ENST00000470049 478 ntBASIC4.42□□□□□ -1.7
THBS1P07996 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.42□□□□□ -1.7
THBS1P07996 RNU5E-3P-201ENST00000515913 68 ntBASIC4.42□□□□□ -1.7
THBS1P07996 RN7SKP276-201ENST00000516242 268 ntBASIC4.42□□□□□ -1.7
THBS1P07996 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
THBS1P07996 AL359198.2-201ENST00000611836 194 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms