Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC009518.2-201ENST00000418056 731 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 ISCA1P6-201ENST00000427740 390 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 RPL32P28-201ENST00000443577 397 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AL360271.2-201ENST00000447710 161 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC011753.1-201ENST00000451001 220 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC140059.1-201ENST00000489238 361 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC090572.1-201ENST00000519251 160 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 IGKV3-31-201ENST00000523109 329 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC145350.1-201ENST00000567426 208 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC009127.3-201ENST00000570531 403 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 RPS15AP11-201ENST00000594193 385 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AL138963.2-201ENST00000605137 226 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC087045.1-201ENST00000605856 382 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC008250.2-201ENST00000615261 205 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AL603755.1-201ENST00000619504 163 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC093648.1-201ENST00000623546 606 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AL359740.1-201ENST00000624340 592 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AC019226.2-201ENST00000625973 424 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DPB1P04440 RNU6-858P-201ENST00000362436 107 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 MIR10A-201ENST00000385043 110 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 MIR524-201ENST00000385242 87 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 SNORA40.3-201ENST00000390964 122 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 U3.40-201ENST00000408706 208 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AL353621.1-201ENST00000418219 243 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 MTND2P18-201ENST00000419962 1030 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AC000111.3-201ENST00000433478 193 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AC009961.2-201ENST00000435771 251 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.73□□□□□ -2.13
HLA-DPB1P04440 CALM1P1-201ENST00000442082 433 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DPB1P04440 RPL7P12-201ENST00000446719 750 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 GAPDHP17-201ENST00000449858 1001 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 MED28P2-201ENST00000475771 317 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AC018437.1-201ENST00000492214 406 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AF213884.2-201ENST00000510417 903 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 Vault.3-201ENST00000516676 95 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AL133241.1-201ENST00000556832 487 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DPB1P04440 MIR5089-201ENST00000580047 84 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 MIR4648-201ENST00000580107 72 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 MIR548AC-201ENST00000585049 88 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 SNRPGP19-201ENST00000603826 189 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AC013412.1-201ENST00000610687 192 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AC110994.2-201ENST00000635481 492 ntBASIC1.73□□□□□ -2.13
HLA-DPB1P04440 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HLA-DPB1P04440 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DPB1P04440 AL359851.1-201ENST00000569460 4997 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HLA-DPB1P04440 MIR412-201ENST00000362142 91 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 SNORA70B-201ENST00000384210 135 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 RNU6-72P-201ENST00000384285 79 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 RNU1-148P-201ENST00000384472 162 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 RNU6-1179P-201ENST00000384667 107 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 RN7SKP192-201ENST00000411291 327 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AL627311.1-201ENST00000431514 115 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AL353706.1-201ENST00000436728 494 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AC073614.1-201ENST00000438690 650 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.72□□□□□ -2.13
HLA-DPB1P04440 MTND3P7-201ENST00000474435 343 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 RPL22P13-201ENST00000493291 347 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 RPS29P21-201ENST00000496272 170 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.72□□□□□ -2.13
HLA-DPB1P04440 RNU1-86P-201ENST00000516108 154 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 RNU5B-3P-201ENST00000516601 115 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 RNU1-107P-201ENST00000516617 154 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 DUXAP5-201ENST00000529668 529 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DPB1P04440 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AL138889.2-201ENST00000603883 242 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 AC092656.1-203ENST00000624134 423 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 RBBP8P1-201ENST00000449447 1844 ntBASIC1.72□□□□□ -2.13
HLA-DPB1P04440 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms