Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.51□□□□□ -2.17
VAPBO95292 AL022345.1-201ENST00000607292 135 ntBASIC1.51□□□□□ -2.17
VAPBO95292 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.51□□□□□ -2.17
VAPBO95292 MTND5P10-201ENST00000603719 1809 ntBASIC1.51□□□□□ -2.17
VAPBO95292 RNY4P24-201ENST00000362735 96 ntBASIC1.5□□□□□ -2.17
VAPBO95292 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
VAPBO95292 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VAPBO95292 MIR517C-201ENST00000385103 95 ntBASIC1.5□□□□□ -2.17
VAPBO95292 MIR1262-201ENST00000408276 93 ntBASIC1.5□□□□□ -2.17
VAPBO95292 RN7SKP284-201ENST00000411002 343 ntBASIC1.5□□□□□ -2.17
VAPBO95292 AC006366.1-201ENST00000422002 759 ntBASIC1.5□□□□□ -2.17
VAPBO95292 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.5□□□□□ -2.17
VAPBO95292 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.5□□□□□ -2.17
VAPBO95292 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.5□□□□□ -2.17
VAPBO95292 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.5□□□□□ -2.17
VAPBO95292 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.5□□□□□ -2.17
VAPBO95292 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.5□□□□□ -2.17
VAPBO95292 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.5□□□□□ -2.17
VAPBO95292 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.5□□□□□ -2.17
VAPBO95292 AL583843.1-201ENST00000456070 346 ntBASIC1.5□□□□□ -2.17
VAPBO95292 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.5□□□□□ -2.17
VAPBO95292 SNORD13-201ENST00000459299 104 ntBASIC1.5□□□□□ -2.17
VAPBO95292 FO393415.2-201ENST00000480085 343 ntBASIC1.5□□□□□ -2.17
VAPBO95292 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.5□□□□□ -2.17
VAPBO95292 YWHAEP4-201ENST00000505390 198 ntBASIC1.5□□□□□ -2.17
VAPBO95292 PTP4A1P4-201ENST00000512479 322 ntBASIC1.5□□□□□ -2.17
VAPBO95292 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.5□□□□□ -2.17
VAPBO95292 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.5□□□□□ -2.17
VAPBO95292 AP004607.1-201ENST00000524456 203 ntBASIC1.5□□□□□ -2.17
VAPBO95292 AC022616.8-201ENST00000533569 253 ntBASIC1.5□□□□□ -2.17
VAPBO95292 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.5□□□□□ -2.17
VAPBO95292 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.5□□□□□ -2.17
VAPBO95292 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.5□□□□□ -2.17
VAPBO95292 AC174048.1-201ENST00000603389 144 ntBASIC1.5□□□□□ -2.17
VAPBO95292 MTND3P19-201ENST00000603825 345 ntBASIC1.5□□□□□ -2.17
VAPBO95292 AL592221.1-201ENST00000605266 382 ntBASIC1.5□□□□□ -2.17
VAPBO95292 AC103810.8-201ENST00000607347 118 ntBASIC1.5□□□□□ -2.17
VAPBO95292 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VAPBO95292 AP000648.3-201ENST00000623539 4507 ntBASIC1.49□□□□□ -2.17
VAPBO95292 MIR126-201ENST00000362291 85 ntBASIC1.49□□□□□ -2.17
VAPBO95292 RNU5E-10P-201ENST00000363506 118 ntBASIC1.49□□□□□ -2.17
VAPBO95292 RNU6-487P-201ENST00000365430 104 ntBASIC1.49□□□□□ -2.17
VAPBO95292 SMIM11P1-201ENST00000369586 178 ntBASIC1.49□□□□□ -2.17
VAPBO95292 MIR597-201ENST00000384968 97 ntBASIC1.49□□□□□ -2.17
VAPBO95292 BTF3L4P2-201ENST00000392798 346 ntBASIC1.49□□□□□ -2.17
VAPBO95292 SRIP3-201ENST00000413200 219 ntBASIC1.49□□□□□ -2.17
VAPBO95292 MTND3P1-201ENST00000441336 220 ntBASIC1.49□□□□□ -2.17
VAPBO95292 AL360221.1-201ENST00000445989 335 ntBASIC1.49□□□□□ -2.17
VAPBO95292 AL606517.1-201ENST00000446914 387 ntBASIC1.49□□□□□ -2.17
VAPBO95292 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.49□□□□□ -2.17
VAPBO95292 RNU6-970P-201ENST00000516312 107 ntBASIC1.49□□□□□ -2.17
VAPBO95292 Y_RNA.675-201ENST00000516389 149 ntBASIC1.49□□□□□ -2.17
VAPBO95292 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.49□□□□□ -2.17
VAPBO95292 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.49□□□□□ -2.17
VAPBO95292 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.49□□□□□ -2.17
VAPBO95292 AC025678.1-201ENST00000567861 338 ntBASIC1.49□□□□□ -2.17
VAPBO95292 AC136618.2-201ENST00000575091 400 ntBASIC1.49□□□□□ -2.17
VAPBO95292 SNORD53B-201ENST00000577887 78 ntBASIC1.49□□□□□ -2.17
VAPBO95292 BCRP9-201ENST00000605312 388 ntBASIC1.49□□□□□ -2.17
VAPBO95292 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.49□□□□□ -2.17
VAPBO95292 AL138960.2-201ENST00000625145 535 ntBASIC1.49□□□□□ -2.17
VAPBO95292 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
VAPBO95292 RNU1-58P-201ENST00000362413 163 ntBASIC1.48□□□□□ -2.17
VAPBO95292 RNU6-1210P-201ENST00000363775 107 ntBASIC1.48□□□□□ -2.17
VAPBO95292 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
VAPBO95292 AC068050.1-201ENST00000394891 380 ntBASIC1.48□□□□□ -2.17
VAPBO95292 SNORA11.2-201ENST00000408318 127 ntBASIC1.48□□□□□ -2.17
VAPBO95292 RNU2-36P-201ENST00000410361 191 ntBASIC1.48□□□□□ -2.17
VAPBO95292 AL365338.1-201ENST00000422282 858 ntBASIC1.48□□□□□ -2.17
VAPBO95292 AL513185.2-201ENST00000425543 193 ntBASIC1.48□□□□□ -2.17
VAPBO95292 AL121890.1-201ENST00000435457 205 ntBASIC1.48□□□□□ -2.17
VAPBO95292 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.48□□□□□ -2.17
VAPBO95292 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.48□□□□□ -2.17
VAPBO95292 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.48□□□□□ -2.17
VAPBO95292 RNU1-98P-201ENST00000458992 160 ntBASIC1.48□□□□□ -2.17
VAPBO95292 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.48□□□□□ -2.17
VAPBO95292 FAM206BP-201ENST00000510179 541 ntBASIC1.48□□□□□ -2.17
VAPBO95292 RNU6-1092P-201ENST00000516955 87 ntBASIC1.48□□□□□ -2.17
VAPBO95292 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.48□□□□□ -2.17
VAPBO95292 AC022880.1-201ENST00000534017 973 ntBASIC1.48□□□□□ -2.17
VAPBO95292 AC023050.2-201ENST00000544968 387 ntBASIC1.48□□□□□ -2.17
VAPBO95292 ARL2BPP2-201ENST00000550907 489 ntBASIC1.48□□□□□ -2.17
VAPBO95292 AL354943.1-201ENST00000572103 781 ntBASIC1.48□□□□□ -2.17
VAPBO95292 MIR3146-201ENST00000580367 79 ntBASIC1.48□□□□□ -2.17
VAPBO95292 CLIC4P2-201ENST00000601934 717 ntBASIC1.48□□□□□ -2.17
VAPBO95292 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.48□□□□□ -2.17
VAPBO95292 Z82243.1-201ENST00000609432 473 ntBASIC1.48□□□□□ -2.17
VAPBO95292 AC005858.4-201ENST00000623191 700 ntBASIC1.48□□□□□ -2.17
VAPBO95292 AC093648.1-201ENST00000623546 606 ntBASIC1.48□□□□□ -2.17
VAPBO95292 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.48□□□□□ -2.17
VAPBO95292 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.48□□□□□ -2.17
VAPBO95292 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.48□□□□□ -2.17
VAPBO95292 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
VAPBO95292 AC233981.2-201ENST00000611524 1614 ntBASIC1.48□□□□□ -2.17
VAPBO95292 MIR30A-201ENST00000385092 71 ntBASIC1.47□□□□□ -2.17
VAPBO95292 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VAPBO95292 SNORA67.6-201ENST00000391093 99 ntBASIC1.47□□□□□ -2.17
VAPBO95292 RNU2-48P-201ENST00000410694 191 ntBASIC1.47□□□□□ -2.17
VAPBO95292 AC009310.1-201ENST00000414414 451 ntBASIC1.47□□□□□ -2.17
VAPBO95292 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms