Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 RNU6-1167P-201ENST00000363227 94 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 RNU6-890P-201ENST00000384121 107 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 Y_RNA.534-201ENST00000384599 112 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 RNU6-95P-201ENST00000384697 107 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 AL031121.1-201ENST00000406553 254 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 Y_RNA.594-201ENST00000410373 140 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 RNU6-1050P-201ENST00000410388 107 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 RNA5SP344-201ENST00000411081 104 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.18□□□□□ -1.9
CNOT3O75175 BMS1P22-201ENST00000414726 313 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 PMCHL1-202ENST00000423102 261 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.18□□□□□ -1.9
CNOT3O75175 AC091390.3-201ENST00000426478 338 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 AC007919.1-201ENST00000429380 217 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 HMGB1P9-201ENST00000429856 646 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 RPL23AP50-201ENST00000434149 455 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.18□□□□□ -1.9
CNOT3O75175 AL360271.2-201ENST00000447710 161 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.18□□□□□ -1.9
CNOT3O75175 RPL31P60-201ENST00000478450 367 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.18□□□□□ -1.9
CNOT3O75175 SUMO2P6-201ENST00000505273 288 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 HMGB1P22-201ENST00000505315 124 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 AL359273.1-201ENST00000510918 627 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 Y_RNA.661-201ENST00000516003 99 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.18□□□□□ -1.9
CNOT3O75175 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CNOT3O75175 MIR4474-201ENST00000579189 78 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 MIR4276-201ENST00000584832 70 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.18□□□□□ -1.9
CNOT3O75175 AP000654.2-201ENST00000605633 586 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 AP002826.1-201ENST00000608835 315 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 AC011890.2-201ENST00000613393 294 ntBASIC3.18□□□□□ -1.9
CNOT3O75175 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CNOT3O75175 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CNOT3O75175 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CNOT3O75175 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
CNOT3O75175 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
CNOT3O75175 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.17□□□□□ -1.9
CNOT3O75175 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.17□□□□□ -1.9
CNOT3O75175 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CNOT3O75175 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CNOT3O75175 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CNOT3O75175 SNORD62.1-201ENST00000362541 86 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 Y_RNA.28-201ENST00000362554 111 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 Y_RNA.145-201ENST00000363527 102 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 RNU6-1040P-201ENST00000383974 107 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 MIR301A-201ENST00000385261 86 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 SNORD73A-201ENST00000386062 65 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CNOT3O75175 RN7SKP58-201ENST00000411010 305 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 RNU6-293P-201ENST00000411259 106 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 Z99755.1-201ENST00000414048 380 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CNOT3O75175 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.17□□□□□ -1.9
CNOT3O75175 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.17□□□□□ -1.9
CNOT3O75175 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.17□□□□□ -1.9
CNOT3O75175 CYCSP32-201ENST00000440548 321 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 AL137792.2-201ENST00000443484 235 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 RPS24P6-201ENST00000452670 400 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.17□□□□□ -1.9
CNOT3O75175 AC006483.1-201ENST00000487308 313 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 AC097473.1-201ENST00000508142 408 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 AC092436.3-201ENST00000511788 257 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 Y_RNA.670-201ENST00000516255 105 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 RNU6-1073P-201ENST00000517182 106 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 RN7SKP295-201ENST00000517264 153 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 AC022634.1-201ENST00000520765 532 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 AC007536.1-201ENST00000533382 349 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.17□□□□□ -1.9
CNOT3O75175 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.17□□□□□ -1.9
CNOT3O75175 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.17□□□□□ -1.9
CNOT3O75175 BNIP3P16-201ENST00000589779 534 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 AC018462.2-201ENST00000605375 395 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 SNORD39.4-201ENST00000620099 78 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 MIR8057-201ENST00000620957 69 ntBASIC3.17□□□□□ -1.9
CNOT3O75175 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CNOT3O75175 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.17□□□□□ -1.9
CNOT3O75175 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CNOT3O75175 AC017071.1-201ENST00000564407 2204 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
CNOT3O75175 Y_RNA.2-201ENST00000362330 96 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 AL357075.1-201ENST00000404107 726 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CNOT3O75175 AC113618.1-201ENST00000416747 285 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 RPL27AP8-201ENST00000424277 446 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 HIGD1AP11-201ENST00000438361 280 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.16□□□□□ -1.9
CNOT3O75175 AC087588.1-201ENST00000462203 316 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 AC018437.1-201ENST00000492214 406 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 RN7SL504P-201ENST00000494496 287 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.16□□□□□ -1.9
CNOT3O75175 PTP4A1P4-201ENST00000512479 322 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 AC026782.1-201ENST00000512952 449 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 RNU6-976P-201ENST00000516086 111 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 RNU6-1315P-201ENST00000517187 99 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 DNAJC8P1-201ENST00000554535 372 ntBASIC3.16□□□□□ -1.9
CNOT3O75175 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.16□□□□□ -1.9
CNOT3O75175 OR1M4P-201ENST00000589199 287 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms