Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.49□□□□□ -2.01
SNX3O60493 MTND1P34-201ENST00000438556 671 ntBASIC2.49□□□□□ -2.01
SNX3O60493 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.49□□□□□ -2.01
SNX3O60493 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.49□□□□□ -2.01
SNX3O60493 UBBP3-201ENST00000445497 241 ntBASIC2.49□□□□□ -2.01
SNX3O60493 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.49□□□□□ -2.01
SNX3O60493 AP000852.1-201ENST00000472460 573 ntBASIC2.49□□□□□ -2.01
SNX3O60493 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.49□□□□□ -2.01
SNX3O60493 RNU6-1281P-201ENST00000516223 105 ntBASIC2.49□□□□□ -2.01
SNX3O60493 AP004607.1-201ENST00000524456 203 ntBASIC2.49□□□□□ -2.01
SNX3O60493 AL138976.2-201ENST00000563989 694 ntBASIC2.49□□□□□ -2.01
SNX3O60493 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.49□□□□□ -2.01
SNX3O60493 AC103810.1-201ENST00000579873 453 ntBASIC2.49□□□□□ -2.01
SNX3O60493 AC090616.3-201ENST00000582184 217 ntBASIC2.49□□□□□ -2.01
SNX3O60493 AL021997.1-201ENST00000605757 193 ntBASIC2.49□□□□□ -2.01
SNX3O60493 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.49□□□□□ -2.01
SNX3O60493 AC026585.1-201ENST00000619582 524 ntBASIC2.49□□□□□ -2.01
SNX3O60493 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
SNX3O60493 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNX3O60493 AC026241.1-201ENST00000517873 2142 ntBASIC2.48□□□□□ -2.01
SNX3O60493 MIR21-201ENST00000362134 72 ntBASIC2.48□□□□□ -2.01
SNX3O60493 RNU6-1090P-201ENST00000364065 94 ntBASIC2.48□□□□□ -2.01
SNX3O60493 AL133475.1-201ENST00000404414 305 ntBASIC2.48□□□□□ -2.01
SNX3O60493 BX682237.1-201ENST00000415016 335 ntBASIC2.48□□□□□ -2.01
SNX3O60493 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.48□□□□□ -2.01
SNX3O60493 TOMM20P4-201ENST00000427861 435 ntBASIC2.48□□□□□ -2.01
SNX3O60493 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.48□□□□□ -2.01
SNX3O60493 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX3O60493 RN7SL807P-201ENST00000470923 297 ntBASIC2.48□□□□□ -2.01
SNX3O60493 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.48□□□□□ -2.01
SNX3O60493 RPS29P26-201ENST00000477483 171 ntBASIC2.48□□□□□ -2.01
SNX3O60493 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SNX3O60493 RNU4-29P-201ENST00000515943 174 ntBASIC2.48□□□□□ -2.01
SNX3O60493 RNU6-1038P-201ENST00000516516 104 ntBASIC2.48□□□□□ -2.01
SNX3O60493 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.48□□□□□ -2.01
SNX3O60493 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.48□□□□□ -2.01
SNX3O60493 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX3O60493 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX3O60493 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX3O60493 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX3O60493 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.48□□□□□ -2.01
SNX3O60493 AL670379.10-201ENST00000604330 253 ntBASIC2.48□□□□□ -2.01
SNX3O60493 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.48□□□□□ -2.01
SNX3O60493 AL670379.9-201ENST00000605428 253 ntBASIC2.48□□□□□ -2.01
SNX3O60493 AC002044.1-201ENST00000606707 158 ntBASIC2.48□□□□□ -2.01
SNX3O60493 MIR6798-201ENST00000612887 67 ntBASIC2.48□□□□□ -2.01
SNX3O60493 MIR6075-201ENST00000620782 95 ntBASIC2.48□□□□□ -2.01
SNX3O60493 YWHAEP7-203ENST00000622054 312 ntBASIC2.48□□□□□ -2.01
SNX3O60493 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX3O60493 SCARNA4-202ENST00000625402 129 ntBASIC2.48□□□□□ -2.01
SNX3O60493 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX3O60493 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SNX3O60493 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SNX3O60493 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.48□□□□□ -2.01
SNX3O60493 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.47□□□□□ -2.01
SNX3O60493 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.47□□□□□ -2.01
SNX3O60493 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.47□□□□□ -2.01
SNX3O60493 ZNF720P1-201ENST00000562403 1939 ntBASIC2.47□□□□□ -2.01
SNX3O60493 SNORA71.3-201ENST00000362582 128 ntBASIC2.47□□□□□ -2.01
SNX3O60493 RNU6-461P-201ENST00000364195 107 ntBASIC2.47□□□□□ -2.01
SNX3O60493 RNU6-1180P-201ENST00000364935 107 ntBASIC2.47□□□□□ -2.01
SNX3O60493 RNU4-20P-201ENST00000365601 151 ntBASIC2.47□□□□□ -2.01
SNX3O60493 RNU6-38P-201ENST00000384085 107 ntBASIC2.47□□□□□ -2.01
SNX3O60493 MIR627-201ENST00000384979 97 ntBASIC2.47□□□□□ -2.01
SNX3O60493 AL356057.3-201ENST00000402607 340 ntBASIC2.47□□□□□ -2.01
SNX3O60493 RAP1BP3-201ENST00000407180 549 ntBASIC2.47□□□□□ -2.01
SNX3O60493 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.47□□□□□ -2.01
SNX3O60493 RNU6-1068P-201ENST00000410958 103 ntBASIC2.47□□□□□ -2.01
SNX3O60493 USP9YP27-201ENST00000418455 438 ntBASIC2.47□□□□□ -2.01
SNX3O60493 Z98742.2-201ENST00000431564 187 ntBASIC2.47□□□□□ -2.01
SNX3O60493 AL121601.2-201ENST00000438019 707 ntBASIC2.47□□□□□ -2.01
SNX3O60493 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.47□□□□□ -2.01
SNX3O60493 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.47□□□□□ -2.01
SNX3O60493 RNU6-333P-201ENST00000459117 107 ntBASIC2.47□□□□□ -2.01
SNX3O60493 RNU7-167P-201ENST00000459160 62 ntBASIC2.47□□□□□ -2.01
SNX3O60493 FTH1P2-201ENST00000466086 412 ntBASIC2.47□□□□□ -2.01
SNX3O60493 DYNLL1P5-201ENST00000467158 270 ntBASIC2.47□□□□□ -2.01
SNX3O60493 MTCO3P38-201ENST00000468910 766 ntBASIC2.47□□□□□ -2.01
SNX3O60493 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SNX3O60493 SNORA25.17-201ENST00000517184 124 ntBASIC2.47□□□□□ -2.01
SNX3O60493 COX6CP5-201ENST00000527162 228 ntBASIC2.47□□□□□ -2.01
SNX3O60493 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.47□□□□□ -2.01
SNX3O60493 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.47□□□□□ -2.01
SNX3O60493 AC009163.5-201ENST00000575421 637 ntBASIC2.47□□□□□ -2.01
SNX3O60493 AL162413.1-201ENST00000603198 110 ntBASIC2.47□□□□□ -2.01
SNX3O60493 AC008121.1-201ENST00000603244 268 ntBASIC2.47□□□□□ -2.01
SNX3O60493 AC019159.1-201ENST00000605094 187 ntBASIC2.47□□□□□ -2.01
SNX3O60493 uc_338.14-201ENST00000613162 166 ntBASIC2.47□□□□□ -2.01
SNX3O60493 AC012314.7-201ENST00000619693 93 ntBASIC2.47□□□□□ -2.01
SNX3O60493 RMST_7.1-201ENST00000621935 268 ntBASIC2.47□□□□□ -2.01
SNX3O60493 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.47□□□□□ -2.01
SNX3O60493 MIR1321-201ENST00000637766 79 ntBASIC2.47□□□□□ -2.01
SNX3O60493 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.47□□□□□ -2.01
SNX3O60493 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SNX3O60493 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
SNX3O60493 RNA5SP456-201ENST00000364002 114 ntBASIC2.46□□□□□ -2.02
SNX3O60493 RNU4-66P-201ENST00000365199 138 ntBASIC2.46□□□□□ -2.02
SNX3O60493 SNORA9-201ENST00000384215 133 ntBASIC2.46□□□□□ -2.02
SNX3O60493 Y_RNA.480-201ENST00000384364 102 ntBASIC2.46□□□□□ -2.02
SNX3O60493 FO393413.1-201ENST00000402892 195 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms