Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.67□□□□□ -1.98
SSX4O60224 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.67□□□□□ -1.98
SSX4O60224 ACA59.2-201ENST00000517061 156 ntBASIC2.67□□□□□ -1.98
SSX4O60224 AL118558.2-201ENST00000556294 238 ntBASIC2.67□□□□□ -1.98
SSX4O60224 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.67□□□□□ -1.98
SSX4O60224 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.67□□□□□ -1.98
SSX4O60224 MIR2682-201ENST00000580305 110 ntBASIC2.67□□□□□ -1.98
SSX4O60224 MIR4298-201ENST00000584380 73 ntBASIC2.67□□□□□ -1.98
SSX4O60224 AC010525.2-201ENST00000590920 195 ntBASIC2.67□□□□□ -1.98
SSX4O60224 AC010620.2-201ENST00000600135 313 ntBASIC2.67□□□□□ -1.98
SSX4O60224 uc_338.25-201ENST00000613756 156 ntBASIC2.67□□□□□ -1.98
SSX4O60224 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.67□□□□□ -1.98
SSX4O60224 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SSX4O60224 ZNF519P1-201ENST00000449011 1626 ntBASIC2.67□□□□□ -1.98
SSX4O60224 AC004520.1-201ENST00000608362 1413 ntBASIC2.67□□□□□ -1.98
SSX4O60224 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
SSX4O60224 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.66□□□□□ -1.98
SSX4O60224 Y_RNA.89-201ENST00000363031 102 ntBASIC2.66□□□□□ -1.98
SSX4O60224 Y_RNA.378-201ENST00000365652 113 ntBASIC2.66□□□□□ -1.98
SSX4O60224 Y_RNA.480-201ENST00000384364 102 ntBASIC2.66□□□□□ -1.98
SSX4O60224 RNU6-19P-201ENST00000384718 107 ntBASIC2.66□□□□□ -1.98
SSX4O60224 MIR181A2-201ENST00000384863 110 ntBASIC2.66□□□□□ -1.98
SSX4O60224 FO393413.1-201ENST00000402892 195 ntBASIC2.66□□□□□ -1.98
SSX4O60224 FTH1P15-201ENST00000406984 280 ntBASIC2.66□□□□□ -1.98
SSX4O60224 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.66□□□□□ -1.98
SSX4O60224 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.66□□□□□ -1.98
SSX4O60224 OR9R1P-201ENST00000412200 877 ntBASIC2.66□□□□□ -1.98
SSX4O60224 PTGES3P4-201ENST00000426243 356 ntBASIC2.66□□□□□ -1.98
SSX4O60224 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.66□□□□□ -1.98
SSX4O60224 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.66□□□□□ -1.98
SSX4O60224 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.66□□□□□ -1.98
SSX4O60224 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.66□□□□□ -1.98
SSX4O60224 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.66□□□□□ -1.98
SSX4O60224 OSTCP8-201ENST00000445117 448 ntBASIC2.66□□□□□ -1.98
SSX4O60224 RN7SL297P-201ENST00000483161 293 ntBASIC2.66□□□□□ -1.98
SSX4O60224 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.66□□□□□ -1.98
SSX4O60224 RPL38P4-201ENST00000502376 214 ntBASIC2.66□□□□□ -1.98
SSX4O60224 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.66□□□□□ -1.98
SSX4O60224 AC098799.2-201ENST00000509466 868 ntBASIC2.66□□□□□ -1.98
SSX4O60224 SCARNA17.1-201ENST00000516211 143 ntBASIC2.66□□□□□ -1.98
SSX4O60224 SCARNA17.2-201ENST00000516334 143 ntBASIC2.66□□□□□ -1.98
SSX4O60224 SNORA25.17-201ENST00000517184 124 ntBASIC2.66□□□□□ -1.98
SSX4O60224 MTND1P5-201ENST00000517906 940 ntBASIC2.66□□□□□ -1.98
SSX4O60224 CENPUP1-201ENST00000526649 1202 ntBASIC2.66□□□□□ -1.98
SSX4O60224 GLYCAM1-201ENST00000546596 285 ntBASIC2.66□□□□□ -1.98
SSX4O60224 OR11H5P-201ENST00000554039 926 ntBASIC2.66□□□□□ -1.98
SSX4O60224 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SSX4O60224 RPL23AP78-201ENST00000599928 470 ntBASIC2.66□□□□□ -1.98
SSX4O60224 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.66□□□□□ -1.98
SSX4O60224 AC002044.1-201ENST00000606707 158 ntBASIC2.66□□□□□ -1.98
SSX4O60224 AL020991.1-201ENST00000612314 373 ntBASIC2.66□□□□□ -1.98
SSX4O60224 AC092794.1-201ENST00000612734 582 ntBASIC2.66□□□□□ -1.98
SSX4O60224 SCARNA17.4-201ENST00000614296 143 ntBASIC2.66□□□□□ -1.98
SSX4O60224 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.66□□□□□ -1.98
SSX4O60224 OR4G1P-203ENST00000641984 1631 ntBASIC2.66□□□□□ -1.98
SSX4O60224 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SSX4O60224 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SSX4O60224 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.66□□□□□ -1.98
SSX4O60224 AC000403.1-201ENST00000613696 3585 ntBASIC2.66□□□□□ -1.98
SSX4O60224 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
SSX4O60224 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SSX4O60224 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SSX4O60224 RNU6-942P-201ENST00000363002 107 ntBASIC2.65□□□□□ -1.99
SSX4O60224 Y_RNA.256-201ENST00000364594 104 ntBASIC2.65□□□□□ -1.99
SSX4O60224 SNORA7.4-201ENST00000384249 137 ntBASIC2.65□□□□□ -1.99
SSX4O60224 MIR514A2-201ENST00000385131 88 ntBASIC2.65□□□□□ -1.99
SSX4O60224 MIR514A3-201ENST00000385132 88 ntBASIC2.65□□□□□ -1.99
SSX4O60224 RNA5SP219-201ENST00000390940 113 ntBASIC2.65□□□□□ -1.99
SSX4O60224 RAP1BP3-201ENST00000407180 549 ntBASIC2.65□□□□□ -1.99
SSX4O60224 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.65□□□□□ -1.99
SSX4O60224 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.65□□□□□ -1.99
SSX4O60224 CALM1P1-201ENST00000442082 433 ntBASIC2.65□□□□□ -1.99
SSX4O60224 HIGD1AP2-201ENST00000446367 280 ntBASIC2.65□□□□□ -1.99
SSX4O60224 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.65□□□□□ -1.99
SSX4O60224 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.65□□□□□ -1.99
SSX4O60224 MRPL42P6-201ENST00000486397 371 ntBASIC2.65□□□□□ -1.99
SSX4O60224 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.65□□□□□ -1.99
SSX4O60224 GZMAP1-201ENST00000503054 631 ntBASIC2.65□□□□□ -1.99
SSX4O60224 AC091885.1-201ENST00000506658 268 ntBASIC2.65□□□□□ -1.99
SSX4O60224 AC114781.4-201ENST00000513707 639 ntBASIC2.65□□□□□ -1.99
SSX4O60224 MTND4LP26-201ENST00000518144 282 ntBASIC2.65□□□□□ -1.99
SSX4O60224 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.65□□□□□ -1.99
SSX4O60224 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.65□□□□□ -1.99
SSX4O60224 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.65□□□□□ -1.99
SSX4O60224 AC090115.3-201ENST00000553218 849 ntBASIC2.65□□□□□ -1.99
SSX4O60224 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.65□□□□□ -1.99
SSX4O60224 ATP1B3P1-201ENST00000605365 821 ntBASIC2.65□□□□□ -1.99
SSX4O60224 RPL23AP88-201ENST00000605759 454 ntBASIC2.65□□□□□ -1.99
SSX4O60224 Z82243.1-201ENST00000609432 473 ntBASIC2.65□□□□□ -1.99
SSX4O60224 AC026585.1-201ENST00000619582 524 ntBASIC2.65□□□□□ -1.99
SSX4O60224 SCARNA4-202ENST00000625402 129 ntBASIC2.65□□□□□ -1.99
SSX4O60224 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SSX4O60224 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SSX4O60224 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.65□□□□□ -1.99
SSX4O60224 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SSX4O60224 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.64□□□□□ -1.99
SSX4O60224 RNU6-266P-201ENST00000364225 107 ntBASIC2.64□□□□□ -1.99
SSX4O60224 Y_RNA.231-201ENST00000364358 102 ntBASIC2.64□□□□□ -1.99
SSX4O60224 RNU6-534P-201ENST00000364877 106 ntBASIC2.64□□□□□ -1.99
SSX4O60224 Y_RNA.295-201ENST00000364918 102 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms