Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AP003733.2-201ENST00000529409 171 ntBASIC3.35□□□□□ -1.87
HOXA3O43365 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXA3O43365 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXA3O43365 AC010928.2-201ENST00000588017 287 ntBASIC3.35□□□□□ -1.87
HOXA3O43365 AL606490.9-201ENST00000603331 271 ntBASIC3.35□□□□□ -1.87
HOXA3O43365 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXA3O43365 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXA3O43365 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXA3O43365 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXA3O43365 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXA3O43365 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXA3O43365 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXA3O43365 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXA3O43365 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXA3O43365 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXA3O43365 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
HOXA3O43365 Y_RNA.105-201ENST00000363182 111 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 RNU6-270P-201ENST00000364131 105 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 RNU1-100P-201ENST00000365255 165 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 Y_RNA.350-201ENST00000365409 98 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
HOXA3O43365 MIR23A-201ENST00000385245 73 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 SNORD66.1-201ENST00000391230 76 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXA3O43365 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 AC074117.2-201ENST00000417130 397 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 RPL21P40-201ENST00000428586 483 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 Z98949.2-201ENST00000440996 144 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 U8.22-201ENST00000459141 133 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 RPS4XP13-201ENST00000483219 789 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 RPS29P20-201ENST00000489592 171 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 RPS27AP10-201ENST00000496103 208 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 AC010469.2-201ENST00000496412 480 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA3O43365 AC107222.1-201ENST00000510899 637 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 Y_RNA.680-201ENST00000516441 93 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 RNU6-570P-201ENST00000517051 105 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 CR383656.8-201ENST00000549046 145 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXA3O43365 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA3O43365 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA3O43365 AL451007.1-201ENST00000595491 289 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 RPL7P50-201ENST00000600588 727 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 AC006133.1-201ENST00000617106 264 ntBASIC3.34□□□□□ -1.87
HOXA3O43365 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXA3O43365 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.34□□□□□ -1.88
HOXA3O43365 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.34□□□□□ -1.88
HOXA3O43365 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HOXA3O43365 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
HOXA3O43365 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
HOXA3O43365 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
HOXA3O43365 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXA3O43365 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 SNORD56.1-201ENST00000362913 68 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXA3O43365 RNU6-968P-201ENST00000384076 107 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 MIR513A2-201ENST00000385249 127 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 FTH1P15-201ENST00000406984 280 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 MIR1179-201ENST00000408703 91 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 RNU6-121P-201ENST00000410525 99 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXA3O43365 AL358453.1-201ENST00000422522 250 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXA3O43365 AL353705.4-201ENST00000449661 238 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXA3O43365 HMGN2P16-201ENST00000456802 261 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 RNA5SP310-201ENST00000459084 116 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 TOMM22P6-201ENST00000465035 409 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 RPL30P1-201ENST00000488676 339 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 ANXA2P1-201ENST00000505539 926 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 RNU1-61P-201ENST00000516107 151 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 RN7SKP272-201ENST00000516988 232 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 MIR2355-201ENST00000517199 87 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 IGLV3-26-201ENST00000520756 302 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXA3O43365 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXA3O43365 AC120057.2-201ENST00000571520 271 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 RN7SL703P-201ENST00000578485 302 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.33□□□□□ -1.88
HOXA3O43365 MIR3128-201ENST00000581957 66 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXA3O43365 AL355877.2-201ENST00000603670 358 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 AC024581.2-201ENST00000619986 252 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 AC078938.1-201ENST00000620993 318 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 MIR6500-201ENST00000622700 86 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 AC007656.2-201ENST00000624902 4547 ntBASIC3.33□□□□□ -1.88
HOXA3O43365 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HOXA3O43365 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HOXA3O43365 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
HOXA3O43365 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
HOXA3O43365 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXA3O43365 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXA3O43365 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HOXA3O43365 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXA3O43365 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXA3O43365 CUL1P1-201ENST00000509510 2425 ntBASIC3.32□□□□□ -1.88
HOXA3O43365 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms