Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RNU6-377P-201ENST00000515965 102 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 SNORA31.1-201ENST00000515993 133 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 SNORA31.5-201ENST00000516190 133 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 AC022634.1-201ENST00000520765 532 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 AC018889.1-201ENST00000605372 397 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 AC004852.3-201ENST00000614131 326 ntBASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC85CA6NKD9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CCDC85CA6NKD9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC85CA6NKD9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC85CA6NKD9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 RPL9P7-201ENST00000330965 580 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 MIR369-201ENST00000362155 70 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 RNU6-1115P-201ENST00000362490 106 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 U8.8-201ENST00000365399 135 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 Z82205.1-201ENST00000428456 297 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 AL513043.1-201ENST00000439124 535 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 AL137792.2-201ENST00000443484 235 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 FGF7P3-201ENST00000454645 303 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 snoU13.28-201ENST00000459235 104 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 RPL9P9-202ENST00000466501 579 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 RPL7P42-201ENST00000481005 679 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 DEFB109F-201ENST00000491870 277 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 AC093663.1-201ENST00000497190 394 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 VWA8P1-201ENST00000510889 176 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 RNA5SP356-201ENST00000515972 94 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 SCARNA15.1-201ENST00000516384 125 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 RNU6-307P-201ENST00000516743 106 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 AP000867.2-201ENST00000532468 320 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 AC103996.1-201ENST00000555468 102 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 AC021739.1-201ENST00000559631 174 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 AC005899.2-201ENST00000584353 90 ntBASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC85CA6NKD9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 RNU6-105P-201ENST00000363909 104 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 RNU6-336P-201ENST00000364891 107 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 RNU6-890P-201ENST00000384121 107 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 SNORA41-201ENST00000384675 132 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 MIR3074-201ENST00000384885 81 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 MIR199A2-201ENST00000385289 110 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 AL591034.2-201ENST00000402839 359 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 AL590004.1-201ENST00000405321 300 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 AL513475.1-201ENST00000406602 315 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 Z75741.1-201ENST00000446793 314 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 AC108751.2-201ENST00000469993 231 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 AC006445.1-201ENST00000491925 405 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 RNU6-976P-201ENST00000516086 111 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 AP003072.1-201ENST00000531740 145 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 ELOCP31-201ENST00000540463 467 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 MIR4474-201ENST00000579189 78 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 MIR3171-201ENST00000584270 74 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 AC078795.3-201ENST00000602913 472 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 MTND4LP5-201ENST00000605152 292 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 PLCE1P1-201ENST00000622094 305 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 AC006111.3-201ENST00000622137 383 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 uc_338.22-201ENST00000622722 187 ntBASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC85CA6NKD9 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 AC066616.2-201ENST00000559334 1481 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 RNU6-428P-201ENST00000362942 107 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 RNU6-1059P-201ENST00000363752 98 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 RNU6-1317P-201ENST00000364582 104 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 RNU6-933P-201ENST00000384424 107 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 DBIP2-201ENST00000419076 262 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 AC245291.1-201ENST00000419501 328 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 AC125238.1-201ENST00000448842 249 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 AC114801.2-201ENST00000503825 781 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 AK3P2-201ENST00000507976 429 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 Y_RNA.711-201ENST00000516993 102 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 AC006199.1-201ENST00000548728 219 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 CR383656.8-201ENST00000549046 145 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 SNRPGP18-201ENST00000553000 214 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 AC109446.1-201ENST00000566172 220 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 HMGN2P15-201ENST00000585707 270 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 BNIP3P16-201ENST00000589779 534 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 MIR8076-201ENST00000611401 83 ntBASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC85CA6NKD9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC85CA6NKD9 MAPK10-322ENST00000641485 4530 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms