Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV25A0A0B4J276 MIR4285-201ENST00000581001 85 ntBASIC1.6□□□□□ -2.15
TRAV25A0A0B4J276 AL158032.1-201ENST00000605401 106 ntBASIC1.6□□□□□ -2.15
TRAV25A0A0B4J276 AL139022.2-201ENST00000606934 443 ntBASIC1.6□□□□□ -2.15
TRAV25A0A0B4J276 AC013412.1-201ENST00000610687 192 ntBASIC1.6□□□□□ -2.15
TRAV25A0A0B4J276 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV25A0A0B4J276 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV25A0A0B4J276 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV25A0A0B4J276 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 RNU4-42P-201ENST00000364738 142 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 MIR597-201ENST00000384968 97 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AL445685.2-201ENST00000422551 342 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 RPS27AP14-201ENST00000422868 454 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 SDR42E1P3-201ENST00000438345 502 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 CALM1P1-201ENST00000442082 433 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AL118520.1-201ENST00000450770 291 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AC112492.4-201ENST00000456549 352 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AC013244.3-201ENST00000605614 388 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AC116312.1-201ENST00000606841 314 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AP002360.4-201ENST00000606980 481 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 AL607023.1-201ENST00000620045 248 ntBASIC1.59□□□□□ -2.15
TRAV25A0A0B4J276 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
TRAV25A0A0B4J276 AL356292.1-201ENST00000283110 373 ntBASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 SNORD3E-201ENST00000362899 217 ntBASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 Y_RNA.99-201ENST00000363138 105 ntBASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 MIR620-201ENST00000385232 95 ntBASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 RNA5SP501-201ENST00000410990 112 ntBASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 AC074117.2-201ENST00000417130 397 ntBASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 MTND1P20-201ENST00000430341 950 ntBASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 AL160394.1-201ENST00000624765 724 ntBASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV25A0A0B4J276 RNU6-944P-201ENST00000364023 107 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 RNU6-1164P-201ENST00000364428 107 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 RNU6-809P-201ENST00000384461 107 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 RNU6-83P-201ENST00000384568 112 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 MIR30A-201ENST00000385092 71 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 OR9R1P-201ENST00000412200 877 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 AL590556.1-201ENST00000423231 483 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 MTND1P32-201ENST00000433043 938 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 USP9YP8-201ENST00000441913 500 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 FDX1P2-201ENST00000450769 375 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 AC112204.1-201ENST00000502591 103 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 FAM206BP-201ENST00000510179 541 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 Y_RNA.687-201ENST00000516558 91 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 RNU6-965P-201ENST00000516721 96 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 MTND4LP18-201ENST00000526864 291 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 MIR3118-1-201ENST00000581787 76 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 MIR3945-201ENST00000581853 98 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 WISP1-OT1-201ENST00000602893 642 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 RMST_6.1-201ENST00000611980 203 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 AC091834.1-201ENST00000614543 472 ntBASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV25A0A0B4J276 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 CBX3P1-201ENST00000325243 554 ntBASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 Y_RNA.40-201ENST00000362645 93 ntBASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 SNORD56.2-201ENST00000363242 71 ntBASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 RNU6-234P-201ENST00000365229 104 ntBASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 RNU6-1179P-201ENST00000384667 107 ntBASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 RPS3AP36-201ENST00000398190 775 ntBASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 RN7SKP32-201ENST00000410167 303 ntBASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 RPL22P18-201ENST00000417197 377 ntBASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 CBX3P6-201ENST00000430257 527 ntBASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV25A0A0B4J276 AL136380.1-201ENST00000447970 162 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms