Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RNU6-82P-201ENST00000363970 107 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 RNU6-715P-201ENST00000365204 103 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 Y_RNA.399-201ENST00000383955 105 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 SNORD70.1-201ENST00000391007 85 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AL139039.1-201ENST00000401900 692 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AL592114.1-201ENST00000403842 483 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AC080125.1-201ENST00000414888 684 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AC092047.1-201ENST00000424997 240 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 SAR1AP4-201ENST00000429225 591 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AL592045.1-201ENST00000429867 352 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 HMGB1P27-201ENST00000431429 603 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AC092573.2-201ENST00000434546 243 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AC009237.8-201ENST00000445492 379 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 RNU7-66P-201ENST00000459469 62 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 LRRC34P2-201ENST00000514850 553 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 RPL7P20-201ENST00000520308 745 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 MTCO3P13-201ENST00000577757 781 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AC005261.5-201ENST00000596280 355 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 CTHRC1P1-201ENST00000605383 469 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 DUSP12P1-201ENST00000612874 516 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 AC009248.2-201ENST00000619826 254 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 Z99571.1-201ENST00000636677 394 ntBASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX9Q9Y5X1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC092593.1-201ENST00000515413 1815 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 RNU6-831P-201ENST00000384548 107 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 RNU4-26P-201ENST00000410270 107 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 RNA5SP111-201ENST00000411386 101 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 BX682237.1-201ENST00000415016 335 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 BTF3L4P3-201ENST00000418879 476 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC105272.1-201ENST00000438604 198 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 PRPS1P1-201ENST00000445305 876 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 GSTA11P-201ENST00000452866 669 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AL135752.1-201ENST00000479477 471 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AP004217.1-201ENST00000480579 346 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC083904.1-201ENST00000487828 231 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AL160314.1-201ENST00000490836 438 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 RN7SKP132-201ENST00000516001 208 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 RNU2-69P-201ENST00000516061 100 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 RNU1-103P-201ENST00000516502 125 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 HPRT1P3-201ENST00000539521 576 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 RAB11AP2-201ENST00000545905 639 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC090115.3-201ENST00000553218 849 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 GTF3AP2-201ENST00000557014 266 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 TRAV28-201ENST00000557548 323 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 FGF7P1-201ENST00000582820 288 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC091135.1-201ENST00000585943 307 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC020895.1-201ENST00000595362 272 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AL117336.2-201ENST00000602435 335 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC012119.1-201ENST00000603184 222 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC136601.2-201ENST00000604356 474 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC103705.1-201ENST00000619013 241 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC104985.2-201ENST00000620598 500 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC005858.4-201ENST00000623191 700 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC008669.1-201ENST00000565823 2178 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC007785.2-201ENST00000598627 1916 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 AC138915.1-201ENST00000565427 1685 ntBASIC3.01□□□□□ -1.93
SNX9Q9Y5X1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3□□□□□ -1.93
SNX9Q9Y5X1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
SNX9Q9Y5X1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNX9Q9Y5X1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SNX9Q9Y5X1 Y_RNA.166-201ENST00000363730 102 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 SNORD81.2-201ENST00000365153 76 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 Y_RNA.373-201ENST00000365600 103 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 RNU6-393P-201ENST00000384475 107 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 MIR578-201ENST00000384828 96 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 POLHP1-201ENST00000411806 470 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 ACTR3BP6-201ENST00000422332 1241 ntBASIC3□□□□□ -1.93
SNX9Q9Y5X1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3□□□□□ -1.93
SNX9Q9Y5X1 AL360271.2-201ENST00000447710 161 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms