Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNU6-1332P-201ENST00000516666 104 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 SNORA20.3-201ENST00000516880 132 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AP000889.2-201ENST00000532684 490 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AC010620.2-201ENST00000600135 313 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AL161756.2-201ENST00000604597 246 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AC096772.1-201ENST00000609146 564 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AC099778.2-201ENST00000610904 211 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 FAM157A-202ENST00000615155 405 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AC138627.2-201ENST00000624202 601 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 MTND5P30-201ENST00000452896 1731 ntBASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-1252P-201ENST00000363054 104 ntBASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 RNA5SP197-201ENST00000363357 119 ntBASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 RNA5SP120-201ENST00000410900 112 ntBASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 AC138393.2-201ENST00000414742 246 ntBASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 AL117339.3-201ENST00000418733 162 ntBASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 MTCO3P46-201ENST00000425787 232 ntBASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 IFNA20P-201ENST00000436840 528 ntBASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 MTCO2P3-201ENST00000442543 421 ntBASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 AC013470.1-201ENST00000453438 462 ntBASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-864P-201ENST00000516256 108 ntBASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 AC107953.1-201ENST00000522216 297 ntBASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 AP005597.4-201ENST00000526762 229 ntBASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL4A3BPQ9Y5P4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-1329P-201ENST00000365664 107 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-831P-201ENST00000384548 107 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 AL445529.1-201ENST00000398713 389 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 AC074117.2-201ENST00000417130 397 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 BX679664.1-201ENST00000434429 253 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 AC098614.3-201ENST00000438957 440 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 RPS3AP12-201ENST00000443616 753 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 RPL22P13-201ENST00000493291 347 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 AK3P2-201ENST00000507976 429 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU4-49P-201ENST00000516080 140 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 AC243972.3-201ENST00000539655 198 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 GLYCAM1-201ENST00000546596 285 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 AC026371.1-201ENST00000551867 419 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 MIR548S-201ENST00000581352 82 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 MIR4276-201ENST00000584832 70 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 VN1R107P-201ENST00000601784 209 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 AC021646.1-201ENST00000605469 484 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 AC092628.2-201ENST00000622492 339 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 AC244517.12-201ENST00000623581 663 ntBASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL4A3BPQ9Y5P4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-105P-201ENST00000363909 104 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-827P-201ENST00000365553 106 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 Y_RNA.390-201ENST00000383932 102 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-1148P-201ENST00000410992 104 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 AL356968.1-201ENST00000416622 474 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 BX510359.1-201ENST00000456973 237 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-1037P-201ENST00000459571 107 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 AP001324.2-201ENST00000461163 319 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 MIR5195-201ENST00000583555 115 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 AC019159.1-201ENST00000605094 187 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 AL442067.2-201ENST00000614033 363 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 Z83843.1-201ENST00000604070 3685 ntBASIC3.73□□□□□ -1.81
COL4A3BPQ9Y5P4 AL359854.1-201ENST00000614203 1594 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 RBBP8P1-201ENST00000449447 1844 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 Y_RNA.88-201ENST00000363029 99 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms