Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RNU6-1011P-201ENST00000384668 107 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 RNA5SP354-201ENST00000391247 136 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AL513475.1-201ENST00000406602 315 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-1050P-201ENST00000410388 107 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AL365496.1-201ENST00000426885 215 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 RN7SL293P-201ENST00000481765 281 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 MRPL42P6-201ENST00000486397 371 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AC010265.1-201ENST00000513509 211 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU5F-8P-201ENST00000515941 111 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AC007991.1-201ENST00000522680 631 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AC103996.1-201ENST00000555468 102 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AL356157.2-201ENST00000605122 111 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 MIR7975-201ENST00000619350 68 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AC024581.2-201ENST00000619986 252 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AC022140.2-201ENST00000623500 188 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 AL359757.2-201ENST00000624309 274 ntBASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA9Q9Y5G4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-1188P-201ENST00000363795 107 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-105P-201ENST00000363909 104 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-19P-201ENST00000384718 107 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-750P-201ENST00000390946 107 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU4-14P-201ENST00000410858 122 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 AC023141.4-201ENST00000412031 328 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 PTGES3P4-201ENST00000426243 356 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 AC104619.4-201ENST00000510773 249 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 AC074250.1-201ENST00000511117 192 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 AC026782.1-201ENST00000512952 449 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 RNU6-581P-201ENST00000516214 105 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 APOOP3-201ENST00000536787 586 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 DNAJC8P1-201ENST00000554535 372 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 AC020895.1-201ENST00000595362 272 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 AC011890.2-201ENST00000613393 294 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 AC084781.2-201ENST00000615568 161 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 AC244205.2-202ENST00000635781 342 ntBASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA9Q9Y5G4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 Y_RNA.187-201ENST00000363918 113 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU6-487P-201ENST00000365430 104 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 SNORD116-20-201ENST00000384529 92 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU6-748P-201ENST00000384648 107 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 MIR218-2-201ENST00000385006 110 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 SNORA75.4-201ENST00000391278 119 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 FTH1P15-201ENST00000406984 280 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 AC074117.2-201ENST00000417130 397 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 MTND1P14-201ENST00000427400 950 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 HMGB1P37-201ENST00000439613 609 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 RPS3AP46-201ENST00000448352 682 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 SNORD105B-201ENST00000458770 79 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU7-152P-201ENST00000458982 64 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 AC107626.1-201ENST00000471084 183 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 MED28P2-201ENST00000475771 317 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 ACA59.2-201ENST00000517061 156 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 AP005902.1-201ENST00000521358 186 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 MIR5195-201ENST00000583555 115 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 AC044792.1-201ENST00000593294 196 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 AP000654.2-201ENST00000605633 586 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU6-91P-201ENST00000607774 107 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 MIR8076-201ENST00000611401 83 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 AC135507.2-201ENST00000612443 309 ntBASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms