Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 MIR367-201ENST00000362299 68 ntBASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 U8.1-201ENST00000362843 134 ntBASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 Y_RNA.114-201ENST00000363265 113 ntBASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 Y_RNA.310-201ENST00000365063 113 ntBASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 Y_RNA.341-201ENST00000365341 102 ntBASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 SNORA20B-201ENST00000384220 132 ntBASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 Y_RNA.456-201ENST00000384232 111 ntBASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 RNU1-103P-201ENST00000516502 125 ntBASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 MIR3934-201ENST00000579806 107 ntBASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 AL031595.2-201ENST00000624215 19071 ntBASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 MAPK10-263ENST00000641052 4307 ntBASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHB3Q9Y5E6 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 AL450345.1-202ENST00000605741 3881 ntBASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 AC126755.2-208ENST00000327792 462 ntBASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 AC138969.1-213ENST00000331436 462 ntBASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 RNU6-294P-201ENST00000364999 102 ntBASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 MIR600-201ENST00000385007 98 ntBASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 RN7SKP16-201ENST00000410180 299 ntBASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 AL353748.1-201ENST00000440753 474 ntBASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 RPL31P41-201ENST00000477967 372 ntBASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 SNORA31.16-201ENST00000516773 139 ntBASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 AC025946.2-201ENST00000603398 234 ntBASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 BX005214.3-202ENST00000619809 325 ntBASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 AC004925.1-201ENST00000624256 2706 ntBASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 AC018555.1-201ENST00000567548 1980 ntBASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB3Q9Y5E6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 AC138915.1-201ENST00000565427 1685 ntBASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 AC008079.2-201ENST00000623543 20396 ntBASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 RNU6-1336P-201ENST00000383886 109 ntBASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 RNU6-905P-201ENST00000384434 107 ntBASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 RNU6-140P-201ENST00000384566 108 ntBASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 FTH1P15-201ENST00000406984 280 ntBASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 RPL26P9-201ENST00000457466 433 ntBASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 AC009127.1-201ENST00000467090 155 ntBASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 BX284632.1-201ENST00000478218 541 ntBASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 RN7SL591P-201ENST00000496150 292 ntBASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 AC108145.1-201ENST00000503770 153 ntBASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 MIR6134-201ENST00000617606 109 ntBASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PCDHB3Q9Y5E6 AC022336.2-201ENST00000568966 2538 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 RNU6-144P-201ENST00000383951 107 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 MIR589-201ENST00000385238 99 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 MIR320B2-201ENST00000408479 138 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 MLLT10P1-201ENST00000418346 262 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 AC245047.4-201ENST00000433189 144 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 AC112498.1-201ENST00000444401 332 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 AC125238.1-201ENST00000448842 249 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms