Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 WWP1P1-201ENST00000466609 2769 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 Y_RNA.245-201ENST00000364493 95 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 RNU6-198P-201ENST00000384258 104 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 RNU2-20P-201ENST00000410425 191 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 RN7SKP142-201ENST00000411236 328 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 RNA5SP492-201ENST00000411330 114 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 RPL26P27-201ENST00000414397 437 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 HSPE1P1-201ENST00000421494 318 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 BRK1P2-201ENST00000442875 223 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 MTND2P4-201ENST00000445034 1004 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 MTCYBP1-201ENST00000454315 1119 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC098591.2-201ENST00000510152 315 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 SNORA31.3-201ENST00000516029 96 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 SNORD27.1-201ENST00000516319 72 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 Y_RNA.688-201ENST00000516565 95 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC024909.2-201ENST00000553035 286 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC090888.1-201ENST00000561335 1141 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC137800.2-201ENST00000574375 120 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC040904.1-201ENST00000590850 223 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AL022161.1-201ENST00000604390 213 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC090578.1-201ENST00000604955 591 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AL158063.1-201ENST00000615349 536 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC068831.7-201ENST00000616954 363 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC092140.2-201ENST00000618027 521 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC073343.1-201ENST00000328239 651 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 RNU6-392P-201ENST00000364926 101 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 SNORA40.3-201ENST00000390964 122 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AL163540.1-201ENST00000485382 386 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC091133.4-201ENST00000511142 308 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 RNU6-711P-201ENST00000517255 106 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC093012.1-202ENST00000549403 582 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AL157871.3-201ENST00000557231 293 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC010546.1-201ENST00000569391 485 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 MIR4452-201ENST00000583004 71 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC073544.2-201ENST00000601155 540 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC104073.3-201ENST00000610942 955 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC025594.3-201ENST00000613068 790 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 TUG1_2.1-201ENST00000614234 87 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AL161629.2-201ENST00000615347 275 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC009161.2-201ENST00000624626 138 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AP003399.1-201ENST00000637534 361 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 RNU4-91P-201ENST00000364778 135 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 RNA5SP489-201ENST00000410986 109 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 RNU6-387P-201ENST00000411331 105 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 RNU6-195P-201ENST00000411352 109 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 ELOCP14-201ENST00000428070 331 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 MTND3P21-201ENST00000433774 331 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 ELOCP7-201ENST00000439968 331 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC092473.1-201ENST00000441098 221 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 RNA5SP269-201ENST00000459032 137 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 MTND4LP3-201ENST00000468320 276 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AL049874.1-201ENST00000489560 388 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AL160314.1-201ENST00000490836 438 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC009901.1-201ENST00000506703 541 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 RNU6-1315P-201ENST00000517187 99 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 CBX3P4-201ENST00000538909 354 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 MIR4446-201ENST00000578505 67 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AF038458.1-201ENST00000588406 262 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 HSPE1P7-201ENST00000604681 321 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC019159.1-201ENST00000605094 187 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 BX248123.2-201ENST00000606318 124 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AL359547.2-201ENST00000615810 418 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC112204.3-201ENST00000623822 332 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 AC090582.1-201ENST00000636321 199 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 MTND1P37-201ENST00000636562 264 ntBASIC1.61□□□□□ -2.15
SHANK1Q9Y566 RNY1P12-201ENST00000364251 105 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 SNORD56.5-201ENST00000364281 72 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 RNU6-259P-201ENST00000383999 107 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 RNU6-809P-201ENST00000384461 107 ntBASIC1.6□□□□□ -2.15
SHANK1Q9Y566 NDUFS5P4-201ENST00000412983 318 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms