Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 AP001148.1-201ENST00000624124 2359 ntBASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 HSPA8P1-201ENST00000425843 1833 ntBASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 Y_RNA.111-201ENST00000363248 100 ntBASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 RNU6-886P-201ENST00000384319 105 ntBASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 SNORA12.2-201ENST00000391040 156 ntBASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 RPS29P13-201ENST00000402041 169 ntBASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 SNORA3C-201ENST00000408792 125 ntBASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 MTCO3P29-201ENST00000432119 779 ntBASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 SYF2P1-201ENST00000550658 413 ntBASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 HMGB1P14-201ENST00000557424 591 ntBASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 AC104581.2-201ENST00000572227 430 ntBASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 AC005000.2-201ENST00000605468 310 ntBASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RTCBQ9Y3I0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 Y_RNA.200-201ENST00000364018 102 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 Y_RNA.277-201ENST00000364754 102 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 RNU6-746P-201ENST00000384112 109 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 ATP5A1P2-201ENST00000412323 255 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 RPL23AP22-201ENST00000437556 453 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 SNORA59A-201ENST00000459326 152 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 MLLT10P2-201ENST00000506434 249 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 RNU6-1338P-201ENST00000516328 91 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 MIR2355-201ENST00000517199 87 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 AC136932.1-201ENST00000574771 208 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 AL139395.1-201ENST00000603662 160 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 AL645944.1-201ENST00000603857 493 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 RNU1-30P-201ENST00000606575 163 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 AC091903.1-201ENST00000624322 454 ntBASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RTCBQ9Y3I0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 RNA5SP267-201ENST00000364893 126 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 Y_RNA.405-201ENST00000383979 100 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 Y_RNA.451-201ENST00000384200 100 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 RNY3P4-201ENST00000384428 101 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 Y_RNA.524-201ENST00000384564 100 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 Y_RNA.561-201ENST00000384694 100 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 MIR10A-201ENST00000385043 110 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 MIR199A2-201ENST00000385289 110 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 AL139156.1-201ENST00000412785 841 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 TMEM167AP1-201ENST00000423409 219 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 AL591043.1-201ENST00000432461 424 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 AC013470.1-201ENST00000453438 462 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 RNU7-87P-201ENST00000459343 62 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 RPS20P22-201ENST00000473700 357 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 AL160314.1-201ENST00000490836 438 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 AL359273.1-201ENST00000510918 627 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 ATP5F1P5-201ENST00000526403 760 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 AP002770.2-201ENST00000543613 532 ntBASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RTCBQ9Y3I0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 RNU6-1266P-201ENST00000362794 105 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 Y_RNA.245-201ENST00000364493 95 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 Y_RNA.269-201ENST00000364685 89 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 BX679664.1-201ENST00000434429 253 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 AL136097.1-201ENST00000456945 913 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 BX510359.1-201ENST00000456973 237 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 RPS29P27-201ENST00000463711 170 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 RPL32P34-201ENST00000486380 400 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 RNU7-175P-201ENST00000515915 61 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 SCARNA15.2-201ENST00000516409 127 ntBASIC4.86□□□□□ -1.63
RTCBQ9Y3I0 Y_RNA.706-201ENST00000516933 99 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms