Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RNU6-184P-201ENST00000516514 107 ntBASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 AC027308.1-201ENST00000517993 110 ntBASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 RPL10P14-201ENST00000565265 298 ntBASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 AC090132.2-201ENST00000615881 347 ntBASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 MALAT1.1-201ENST00000618249 95 ntBASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 AL590808.1-201ENST00000618696 141 ntBASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 AC118658.2-201ENST00000618697 459 ntBASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 MIR3202-2-201ENST00000635980 79 ntBASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS9D1Q9Y2B5 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 RNA5SP132-201ENST00000364725 118 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 RNU6-1134P-201ENST00000365156 101 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 RNU6-484P-201ENST00000384016 107 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 RNU1-77P-201ENST00000390868 162 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 RNU6-972P-201ENST00000391208 107 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 MIR1178-201ENST00000408396 91 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 RPL27AP8-201ENST00000424277 446 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 RPS26P47-201ENST00000427219 348 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 TOMM22P2-201ENST00000430735 237 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 AL021397.1-201ENST00000451806 248 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 RPSAP50-201ENST00000481955 852 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 AC103975.1-201ENST00000482506 483 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 ATP5LP3-201ENST00000514223 304 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 SNORA31.16-201ENST00000516773 139 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 RNU6-158P-201ENST00000517104 100 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 RNU1-104P-201ENST00000517280 175 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 MIR3176-201ENST00000582210 90 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 AL162713.1-201ENST00000604480 262 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 U6.115-201ENST00000636045 103 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 AC026951.1-201ENST00000559530 2459 ntBASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VPS9D1Q9Y2B5 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 RNA5SP90-201ENST00000364801 99 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 RNA5SP496-201ENST00000391240 109 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 MIR208B-201ENST00000401172 77 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 MIR1255A-201ENST00000408338 113 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 RNA5SP296-201ENST00000410523 111 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 AC007738.1-201ENST00000413892 348 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 MTATP8P2-201ENST00000435212 202 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 RN7SL629P-201ENST00000489622 285 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 ENPP7P11-201ENST00000505915 627 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 RNU6-1299P-201ENST00000516316 100 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 SNORA31.23-201ENST00000517219 133 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 CKS1BP7-201ENST00000522230 235 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 AC126177.5-201ENST00000549599 178 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 Y_RNA.818-201ENST00000618813 71 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 MIR6719-201ENST00000622428 87 ntBASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS9D1Q9Y2B5 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 AP000542.2-201ENST00000623199 6179 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 SMG1P4-204ENST00000523028 4131 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 Y_RNA.244-201ENST00000364484 109 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 SNORD87-201ENST00000364849 89 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 RNU1-100P-201ENST00000365255 165 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 RNU6-1296P-201ENST00000383879 107 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 U3.26-201ENST00000391236 204 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 AL590004.2-201ENST00000404787 371 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 RN7SKP101-201ENST00000411376 320 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 AC005300.1-201ENST00000428401 373 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 AL590383.1-201ENST00000428602 75 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms