Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 RNU6-61P-201ENST00000365528 109 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 CIR1P3-201ENST00000405137 479 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 AC138623.1-201ENST00000418060 216 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 RPS3AP44-201ENST00000425466 790 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 AL356320.1-201ENST00000429616 163 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 RPL31P35-201ENST00000431058 377 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 AL353706.1-201ENST00000436728 494 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 AL022238.1-201ENST00000442557 355 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 GAPDHP17-201ENST00000449858 1001 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 IGKV3-31-201ENST00000523109 329 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 RANP3-201ENST00000530970 276 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 AP000889.2-201ENST00000532684 490 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 MIR4524B-201ENST00000581569 115 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 AC008521.1-201ENST00000587471 187 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 AC098848.2-201ENST00000588023 330 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 AP001506.1-201ENST00000615444 211 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
RNF6Q9Y252 AC138627.2-201ENST00000624202 601 ntBASIC2.16□□□□□ -2.06
RNF6Q9Y252 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RNF6Q9Y252 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RNF6Q9Y252 U3.4-201ENST00000363352 213 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 OR5H15-201ENST00000383696 930 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 RNU1-52P-201ENST00000384190 164 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 MIR578-201ENST00000384828 96 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 PGBD4P6-201ENST00000421501 610 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 DPH3P2-201ENST00000422618 250 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 EIF4EP4-201ENST00000424916 578 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 AL627311.1-201ENST00000431514 115 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 AC104435.1-201ENST00000483483 166 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 HMGB3P3-201ENST00000510526 400 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 RNU6-237P-201ENST00000515985 71 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 RNA5SP281-201ENST00000516504 135 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 SNORA18.6-201ENST00000516792 115 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 AP005902.1-201ENST00000521358 186 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 AC010378.1-201ENST00000619270 362 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 U6.114-201ENST00000636407 96 ntBASIC2.15□□□□□ -2.07
RNF6Q9Y252 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RNF6Q9Y252 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RNF6Q9Y252 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
RNF6Q9Y252 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
RNF6Q9Y252 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
RNF6Q9Y252 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RNF6Q9Y252 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RNF6Q9Y252 FGF7P2-201ENST00000332473 296 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 Y_RNA.201-201ENST00000364052 96 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 RNU1-91P-201ENST00000364746 163 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 RNU6-116P-201ENST00000384042 109 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RNF6Q9Y252 RNU2-63P-201ENST00000410792 194 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.14□□□□□ -2.07
RNF6Q9Y252 RPL21P90-201ENST00000415692 466 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 BX295541.1-201ENST00000417774 250 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.14□□□□□ -2.07
RNF6Q9Y252 TOMM20P4-201ENST00000427861 435 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.14□□□□□ -2.07
RNF6Q9Y252 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.14□□□□□ -2.07
RNF6Q9Y252 KLF3P2-201ENST00000465138 268 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 RNU5B-3P-201ENST00000516601 115 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 OR5AL2P-201ENST00000532185 920 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 AL133241.1-201ENST00000556832 487 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 AC012414.6-201ENST00000568241 401 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 AL138963.2-201ENST00000605137 226 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 SNORD14A-201ENST00000606526 91 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 AC046143.2-201ENST00000609789 160 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.14□□□□□ -2.07
RNF6Q9Y252 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.14□□□□□ -2.07
RNF6Q9Y252 AC244517.12-201ENST00000623581 663 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 AL359740.1-201ENST00000624340 592 ntBASIC2.14□□□□□ -2.07
RNF6Q9Y252 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms