Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 HMGN2P21-201ENST00000447764 270 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 RNU6-138P-201ENST00000515952 107 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 AC073410.2-201ENST00000603240 332 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 AL137849.1-201ENST00000604767 169 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHA4Q9UN74 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.123-201ENST00000363338 102 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 U3.15-201ENST00000365398 212 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 RPL21P75-201ENST00000396599 483 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 RPL21P28-201ENST00000401418 483 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AL590556.1-201ENST00000423231 483 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 RPL23AP22-201ENST00000437556 453 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AC004383.1-201ENST00000438135 289 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 RPL21P39-201ENST00000463605 483 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AC087190.1-201ENST00000484462 480 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AC107032.1-201ENST00000485945 480 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AC132942.1-201ENST00000486753 483 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AC093591.1-201ENST00000491435 481 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 RPL21P16-201ENST00000495531 483 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AC010265.1-201ENST00000513509 211 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 RNA5SP164-201ENST00000516533 110 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 RN7SKP40-201ENST00000517211 242 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AC022695.1-201ENST00000522089 237 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AC136601.2-201ENST00000604356 474 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AC098479.1-201ENST00000609225 154 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 AC099506.2-201ENST00000623074 221 ntBASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PCDHA4Q9UN74 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 MIR335-201ENST00000362173 94 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 RNU6-1062P-201ENST00000383908 107 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 RNU6-72P-201ENST00000384285 79 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 MIR215-201ENST00000384858 110 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 AC096920.1-201ENST00000423991 241 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 snoU109.2-201ENST00000459316 135 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 AC034236.1-201ENST00000469891 373 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 RN7SL132P-201ENST00000478131 296 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 RNA5SP208-201ENST00000516156 78 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 IGKV2-23-201ENST00000518729 323 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 HSPE1P5-201ENST00000561489 272 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 AC026470.2-201ENST00000561492 181 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 MIR5685-201ENST00000579080 79 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 SNORA62.6-201ENST00000606322 83 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 AC027309.3-201ENST00000623419 351 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 U6.92-201ENST00000636464 89 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 AC008568.2-201ENST00000623862 2313 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 AC007785.2-201ENST00000598627 1916 ntBASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDHA4Q9UN74 AC018529.3-201ENST00000624212 2254 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 RNU6-78P-201ENST00000362897 107 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 SNORD115-46-201ENST00000390982 71 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 RNU4-61P-201ENST00000411243 107 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 SNRPEP9-201ENST00000436794 238 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 AC009237.8-201ENST00000445492 379 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 TRBV12-2-201ENST00000489763 344 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms