Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 PSMA3P-201ENST00000555485 635 ntBASIC3.62□□□□□ -1.83
HDAC9Q9UKV0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.62□□□□□ -1.83
HDAC9Q9UKV0 AC011712.1-201ENST00000588959 234 ntBASIC3.62□□□□□ -1.83
HDAC9Q9UKV0 ATP1B3P1-201ENST00000605365 821 ntBASIC3.62□□□□□ -1.83
HDAC9Q9UKV0 AL591516.1-201ENST00000611326 274 ntBASIC3.62□□□□□ -1.83
HDAC9Q9UKV0 AC025253.1-201ENST00000613623 543 ntBASIC3.62□□□□□ -1.83
HDAC9Q9UKV0 AC104260.1-201ENST00000616660 539 ntBASIC3.62□□□□□ -1.83
HDAC9Q9UKV0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HDAC9Q9UKV0 AC121333.1-201ENST00000567488 2709 ntBASIC3.62□□□□□ -1.83
HDAC9Q9UKV0 MTND4P35-201ENST00000604257 1375 ntBASIC3.62□□□□□ -1.83
HDAC9Q9UKV0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 RNA5SP383-201ENST00000362934 120 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 RNU6-270P-201ENST00000364131 105 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 RNU6-805P-201ENST00000365643 106 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 RNU6-767P-201ENST00000384132 107 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 RNU6-393P-201ENST00000384475 107 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 MIR578-201ENST00000384828 96 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 BX682237.1-201ENST00000415016 335 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 RPS15AP6-201ENST00000420703 385 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 GPM6BP2-201ENST00000432046 144 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 HMGB1P18-201ENST00000438801 619 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 GPM6BP1-201ENST00000446387 144 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 AC091179.1-201ENST00000461606 579 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 DYNLL1P5-201ENST00000467158 270 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 RN7SL442P-201ENST00000473804 320 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 AC104136.1-201ENST00000512969 394 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 AC112206.3-201ENST00000514578 389 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 AC090115.3-201ENST00000553218 849 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 AC138761.3-201ENST00000579993 334 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 AC004852.3-201ENST00000614131 326 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 AC009248.2-201ENST00000619826 254 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 AC073308.1-201ENST00000623696 305 ntBASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.61□□□□□ -1.83
HDAC9Q9UKV0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 RNU6-845P-201ENST00000362578 103 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 Y_RNA.100-201ENST00000363141 102 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 SNORA75B-201ENST00000384053 137 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 POLHP1-201ENST00000411806 470 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 AC009161.1-201ENST00000417306 376 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 HMGN2P30-201ENST00000423237 256 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 MTCO3P46-201ENST00000425787 232 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 AC063976.3-201ENST00000426849 329 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 MYL8P-204ENST00000431574 518 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 PRPS1P1-201ENST00000445305 876 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 CECR9-201ENST00000453421 199 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 snoU13.26-201ENST00000459452 105 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 RNU7-66P-201ENST00000459469 62 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 AC007547.1-201ENST00000462177 490 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 AP002884.2-201ENST00000471647 395 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 RPS15AP34-201ENST00000487776 387 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 RNU6-928P-201ENST00000516876 104 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 AC104027.1-201ENST00000521887 300 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 AL157871.3-201ENST00000557231 293 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 MIR1273C-201ENST00000578669 77 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 AC073539.2-201ENST00000597113 165 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 DUSP12P1-201ENST00000612874 516 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 AL161629.2-201ENST00000615347 275 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 AC103705.1-201ENST00000619013 241 ntBASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.6□□□□□ -1.83
HDAC9Q9UKV0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 RNU6-434P-201ENST00000384376 107 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 RNU6-45P-201ENST00000384471 107 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 MIR196B-201ENST00000384852 84 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 MIR301A-201ENST00000385261 86 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 PDCL2P1-201ENST00000419302 352 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 AC003685.2-201ENST00000422795 395 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 SNRPEP8-201ENST00000442866 260 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 RNU7-167P-201ENST00000459160 62 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 snoU13.28-201ENST00000459235 104 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 AC083904.1-201ENST00000487828 231 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 AC022493.1-201ENST00000492984 337 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 HIGD1AP13-201ENST00000509878 289 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 AC046134.1-201ENST00000514454 666 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 RNU6-143P-201ENST00000516942 93 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms