Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 RAD17P1-201ENST00000418130 2042 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 Y_RNA.27-201ENST00000362540 103 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RNU1-76P-201ENST00000362903 159 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 SNORA29-201ENST00000384183 140 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RNU6-17P-201ENST00000384245 107 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RNU6-18P-201ENST00000384527 107 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RPL21P75-201ENST00000396599 483 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RPL21P28-201ENST00000401418 483 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RNU6-1077P-201ENST00000410506 102 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RNU2-49P-201ENST00000410666 184 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RNA5SP39-201ENST00000411245 120 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 AL590556.1-201ENST00000423231 483 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RPEP3-201ENST00000425462 676 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 PTGES3P4-201ENST00000426243 356 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RPL21P40-201ENST00000428586 483 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 snoU13.1-201ENST00000459157 104 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RPL21P11-201ENST00000461458 483 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RPL21P39-201ENST00000463605 483 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 SNRPGP7-201ENST00000469016 106 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 AC087190.1-201ENST00000484462 480 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 AC107032.1-201ENST00000485945 480 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 AC132942.1-201ENST00000486753 483 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RPS26P15-201ENST00000488067 348 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 AC093591.1-201ENST00000491435 481 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RPL21P16-201ENST00000495531 483 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 AC016632.1-201ENST00000503994 196 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 RN7SKP122-201ENST00000515923 296 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 SNORA31.1-201ENST00000515993 133 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 SNORA31.5-201ENST00000516190 133 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 AL442163.3-201ENST00000554110 156 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 AC090517.1-201ENST00000569307 266 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 MYL12BP1-201ENST00000569826 507 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 MIR5571-201ENST00000577998 113 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 AC091152.3-201ENST00000604227 325 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 AC012603.1-201ENST00000606424 528 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 Z75746.1-201ENST00000440243 2080 ntBASIC4.22□□□□□ -1.73
VTI1BQ9UEU0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
VTI1BQ9UEU0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
VTI1BQ9UEU0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.21□□□□□ -1.73
VTI1BQ9UEU0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
VTI1BQ9UEU0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.21□□□□□ -1.73
VTI1BQ9UEU0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 RNU5B-2P-201ENST00000363036 113 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 Y_RNA.504-201ENST00000384481 104 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 RNU6-748P-201ENST00000384648 107 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 RNU6-713P-201ENST00000384761 107 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 Y_RNA.618-201ENST00000410949 107 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 AL356968.1-201ENST00000416622 474 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 RPL7AP25-201ENST00000423357 805 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 DYNLT3P2-201ENST00000442517 295 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 AC087477.1-201ENST00000465747 340 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 AC107626.1-201ENST00000471084 183 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 SNORA25.11-201ENST00000515935 105 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 AC090617.3-201ENST00000573670 475 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 MIR4715-201ENST00000584117 79 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 AL355877.2-201ENST00000603670 358 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 AC079587.1-201ENST00000603846 277 ntBASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VTI1BQ9UEU0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 RNU6-708P-201ENST00000384217 107 ntBASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 Y_RNA.471-201ENST00000384312 102 ntBASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 Y_RNA.512-201ENST00000384518 102 ntBASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 RNU6-19P-201ENST00000384718 107 ntBASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 MIR32-201ENST00000384965 70 ntBASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 RNA5SP306-201ENST00000411087 107 ntBASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 AL356387.2-201ENST00000422272 243 ntBASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 GPM6BP3-201ENST00000442797 145 ntBASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 RPL35AP15-201ENST00000468042 339 ntBASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 RPS4XP22-201ENST00000480755 780 ntBASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 AC025554.1-201ENST00000505641 188 ntBASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.2□□□□□ -1.74
VTI1BQ9UEU0 TRAV8-5-201ENST00000537369 341 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms