Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 SCARNA4-202ENST00000625402 129 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AC100810.6-201ENST00000638068 285 ntBASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HCN3Q9P1Z3 AC099654.7-201ENST00000635788 2127 ntBASIC2.96□□□□□ -1.93
HCN3Q9P1Z3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
HCN3Q9P1Z3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AL122016.1-201ENST00000403365 367 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 FTH1P15-201ENST00000406984 280 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 MRPS10P2-201ENST00000431226 381 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AC244505.4-201ENST00000434905 287 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 HMGB1P31-201ENST00000437242 427 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 SSXP5-201ENST00000443473 287 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 FTH1P25-201ENST00000447665 469 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AC012308.1-201ENST00000451232 178 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 FGF7P6-202ENST00000451282 293 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AC107626.1-201ENST00000471084 183 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 RPS29P2-201ENST00000479278 136 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AC069439.1-201ENST00000494739 167 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 SNORA25.17-201ENST00000517184 124 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AL133241.1-201ENST00000556832 487 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AL121757.2-201ENST00000611223 313 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AL591516.1-201ENST00000611326 274 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 AC103705.1-201ENST00000619013 241 ntBASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HCN3Q9P1Z3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 SNORA7.4-201ENST00000384249 137 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 SNORD67-201ENST00000390833 111 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 RPL21P3-201ENST00000395517 478 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 MIR1289-1-201ENST00000408836 144 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 AC093151.1-201ENST00000427711 313 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 SRIP2-201ENST00000428470 166 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 RPL23AP58-201ENST00000440453 469 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 AC146507.2-201ENST00000460608 476 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 RPL27AP5-201ENST00000469428 449 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 AC087884.1-201ENST00000469738 328 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 MRPL42P6-201ENST00000486397 371 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 MTCYBP18-201ENST00000501056 747 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 SNORA19.2-201ENST00000516013 114 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 SNORA14.1-201ENST00000516113 141 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 RNU1-143P-201ENST00000516296 146 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 RPL7P20-201ENST00000520308 745 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 CYCSP27-201ENST00000527643 293 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 RNU6-85P-201ENST00000605989 107 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 AL357078.3-201ENST00000607528 618 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 U1.23-201ENST00000610293 146 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 AL162274.2-201ENST00000614406 332 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 RNU1-68P-201ENST00000615382 146 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 AC010378.1-201ENST00000619270 362 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 U1.39-201ENST00000621562 146 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 AL353743.1-202ENST00000431724 1695 ntBASIC2.95□□□□□ -1.94
HCN3Q9P1Z3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 SNORA51.4-201ENST00000364993 124 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 RNU5E-7P-201ENST00000365290 117 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 SNORD15B-201ENST00000384714 146 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 MIR128-1-201ENST00000384921 82 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 RN7SKP123-201ENST00000410732 291 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 MTND1P23-201ENST00000416931 372 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 MTND1P2-201ENST00000430604 821 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 OSTCP8-201ENST00000445117 448 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 AC006026.2-201ENST00000457376 180 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 AL441985.1-201ENST00000457727 251 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 HMGN2P26-201ENST00000463169 339 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 AC117503.1-201ENST00000472241 394 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 Y_RNA.665-201ENST00000516177 98 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 RNA5SP341-201ENST00000516261 117 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 RNU6-323P-201ENST00000521915 107 ntBASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.94□□□□□ -1.94
HCN3Q9P1Z3 MIR4513-201ENST00000581077 86 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms