Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC004817.2-201ENST00000561794 651 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 AC006130.2-201ENST00000586202 326 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 AC008962.1-201ENST00000605729 304 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 U4.1-201ENST00000620349 87 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 AL354798.1-201ENST00000622505 329 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 AL133383.2-201ENST00000622958 2336 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 SNORD50.1-201ENST00000362987 71 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 RNU6-884P-201ENST00000363889 107 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 Y_RNA.193-201ENST00000363979 102 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 RNU6-898P-201ENST00000365627 104 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 U3.37-201ENST00000408528 213 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 SNORA3.3-201ENST00000408712 125 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 TMEM167AP1-201ENST00000423409 219 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 RPS3AP46-201ENST00000448352 682 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 AC010655.3-201ENST00000478818 450 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 RN7SL323P-201ENST00000494712 295 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 MRPS35P2-201ENST00000508242 191 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 SCARNA14-201ENST00000516903 136 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 IGKV2D-19-201ENST00000523346 262 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 AL161670.1-201ENST00000554348 137 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 AC006600.1-201ENST00000572529 153 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 MIR5696-201ENST00000578474 85 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 MIR5188-201ENST00000583467 113 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 AC012531.5-201ENST00000611375 151 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 AL110115.1-201ENST00000614396 364 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 AL138825.1-201ENST00000618587 192 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 U7.8-201ENST00000619968 63 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 U2.21-201ENST00000637295 81 ntBASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
KCMF1Q9P0J7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AL672296.1-201ENST00000427780 2158 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 RNU6-778P-201ENST00000363269 103 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 RNU6-595P-201ENST00000363944 107 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 RNU1-73P-201ENST00000383971 164 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 RNU6-700P-201ENST00000391043 107 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 RNU2-37P-201ENST00000410695 177 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 MTATP6P7-201ENST00000453315 681 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 RPS29P27-201ENST00000463711 170 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 RN7SL542P-201ENST00000467147 294 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 BTF3L4P4-201ENST00000506381 449 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 SLC25A15P5-201ENST00000508033 253 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AC022616.4-201ENST00000522985 181 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AC010186.2-204ENST00000537668 439 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 CYCSP30-201ENST00000546447 172 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AC020895.1-201ENST00000595362 272 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 PRR13P7-201ENST00000605538 430 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AC009318.2-201ENST00000610917 651 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AC097372.5-201ENST00000623665 376 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 AC138305.3-201ENST00000624988 240 ntBASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KCMF1Q9P0J7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 RNU6-227P-201ENST00000362865 103 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 Y_RNA.106-201ENST00000363189 100 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 Y_RNA.123-201ENST00000363338 102 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 MIR30B-201ENST00000384850 88 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms