Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 AC073539.2-201ENST00000597113 165 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 BNIP3P30-201ENST00000601184 574 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 AL121917.1-203ENST00000605534 577 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 AC005332.10-201ENST00000612725 619 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 SEPT14P19-203ENST00000633205 211 ntBASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.31□□□□□ -2.04
ZCCHC3Q9NUD5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 OR56A5-201ENST00000340110 738 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-1287P-201ENST00000362914 107 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 U8.8-201ENST00000365399 135 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-487P-201ENST00000365430 104 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 RNU4-48P-201ENST00000365559 182 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-456P-201ENST00000384493 107 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-1060P-201ENST00000384664 107 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 PGBD4P6-201ENST00000421501 610 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 EIF4EP4-201ENST00000424916 578 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AC073901.1-201ENST00000462471 408 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 RNA5SP82-201ENST00000516707 92 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 MTCO2P4-201ENST00000517968 247 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 CBX3P7-201ENST00000532876 502 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 MIR4528-201ENST00000577763 90 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AC110760.3-201ENST00000598794 467 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AC068790.2-201ENST00000602601 557 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AL138963.2-201ENST00000605137 226 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AC021646.1-201ENST00000605469 484 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 U4.3-201ENST00000621047 82 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AC022079.1-201ENST00000621546 602 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AC009161.2-201ENST00000624626 138 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AL390237.1-201ENST00000404226 1415 ntBASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.3□□□□□ -2.04
ZCCHC3Q9NUD5 AL139276.1-201ENST00000311910 1001 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 OR4G2P-201ENST00000328113 903 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 SNORD114-19-201ENST00000363072 75 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-1029P-201ENST00000384109 107 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 SNORA75-201ENST00000384158 137 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 SNORA41-201ENST00000384675 132 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 MIR524-201ENST00000385242 87 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 RAP1BP3-201ENST00000407180 549 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 RNU2-3P-201ENST00000410144 191 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-607P-201ENST00000411283 108 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AL596276.1-201ENST00000434465 418 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AC132479.1-201ENST00000449160 144 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 C1DP4-201ENST00000455429 424 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-956P-201ENST00000458868 103 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AC090515.1-201ENST00000465295 476 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 MTND3P25-201ENST00000509243 135 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AC104136.1-201ENST00000512969 394 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AP002963.1-201ENST00000530590 184 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AC027176.1-201ENST00000560204 514 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 MYL12BP1-201ENST00000569826 507 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AC098614.4-201ENST00000607601 462 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 AC093788.1-201ENST00000609356 927 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 MIR5739-201ENST00000619803 80 ntBASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.29□□□□□ -2.04
ZCCHC3Q9NUD5 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-1010P-201ENST00000362757 107 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 Y_RNA.77-201ENST00000362962 107 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 SNORA5B-201ENST00000363786 132 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-622P-201ENST00000384272 103 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-45P-201ENST00000384471 107 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 SNORD116-20-201ENST00000384529 92 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 RNA5SP181-201ENST00000410246 98 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 MTCO2P11-201ENST00000431069 680 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 MTND4P32-201ENST00000437189 1237 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 AL109933.2-201ENST00000452651 260 ntBASIC2.28□□□□□ -2.04
ZCCHC3Q9NUD5 AL139109.1-201ENST00000455491 297 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms