Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 Y_RNA.235-201ENST00000364412 102 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.306-201ENST00000365015 102 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.312-201ENST00000365089 102 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.322-201ENST00000365151 102 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.650-201ENST00000459002 102 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.08□□□□□ -1.44
RTN4Q9NQC3 LSM3P4-201ENST00000502948 309 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.777-201ENST00000516982 102 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 RN7SKP183-201ENST00000517169 324 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC6.08□□□□□ -1.44
RTN4Q9NQC3 AC079905.1-201ENST00000549280 475 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 AC133555.2-201ENST00000550213 292 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC6.08□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.771-201ENST00000598668 102 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 Z83818.1-201ENST00000603584 150 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.789-201ENST00000622480 102 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 AC091932.3-201ENST00000624223 323 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTN4Q9NQC3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTN4Q9NQC3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTN4Q9NQC3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC6.07□□□□□ -1.44
RTN4Q9NQC3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC6.07□□□□□ -1.44
RTN4Q9NQC3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTN4Q9NQC3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTN4Q9NQC3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTN4Q9NQC3 RNU1-75P-201ENST00000347264 129 ntBASIC6.07□□□□□ -1.44
RTN4Q9NQC3 RNA5SP477-201ENST00000362639 119 ntBASIC6.07□□□□□ -1.44
RTN4Q9NQC3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.415-201ENST00000384012 112 ntBASIC6.07□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.555-201ENST00000384673 110 ntBASIC6.07□□□□□ -1.44
RTN4Q9NQC3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC6.07□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.793-201ENST00000411222 111 ntBASIC6.07□□□□□ -1.44
RTN4Q9NQC3 MICF-203ENST00000432679 129 ntBASIC6.07□□□□□ -1.44
RTN4Q9NQC3 AC068228.1-201ENST00000461723 211 ntBASIC6.07□□□□□ -1.44
RTN4Q9NQC3 AC108751.2-201ENST00000469993 231 ntBASIC6.07□□□□□ -1.44
RTN4Q9NQC3 AL117692.1-201ENST00000494283 713 ntBASIC6.07□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.667-201ENST00000516212 107 ntBASIC6.07□□□□□ -1.44
RTN4Q9NQC3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC6.07□□□□□ -1.44
RTN4Q9NQC3 MIR3684-201ENST00000579779 74 ntBASIC6.07□□□□□ -1.44
RTN4Q9NQC3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.07□□□□□ -1.44
RTN4Q9NQC3 IMMP1LP3-201ENST00000604197 224 ntBASIC6.07□□□□□ -1.44
RTN4Q9NQC3 MIR7109-201ENST00000613748 65 ntBASIC6.07□□□□□ -1.44
RTN4Q9NQC3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
RTN4Q9NQC3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTN4Q9NQC3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTN4Q9NQC3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.07□□□□□ -1.44
RTN4Q9NQC3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.06□□□□□ -1.44
RTN4Q9NQC3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RTN4Q9NQC3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RTN4Q9NQC3 U3.8-201ENST00000363675 217 ntBASIC6.06□□□□□ -1.44
RTN4Q9NQC3 RNU6-740P-201ENST00000364734 105 ntBASIC6.06□□□□□ -1.44
RTN4Q9NQC3 TIMM8BP2-201ENST00000445940 251 ntBASIC6.06□□□□□ -1.44
RTN4Q9NQC3 AC074290.1-201ENST00000448883 135 ntBASIC6.06□□□□□ -1.44
RTN4Q9NQC3 AC144530.1-201ENST00000452862 555 ntBASIC6.06□□□□□ -1.44
RTN4Q9NQC3 RN7SL583P-201ENST00000475692 287 ntBASIC6.06□□□□□ -1.44
RTN4Q9NQC3 SRIP1-201ENST00000489235 288 ntBASIC6.06□□□□□ -1.44
RTN4Q9NQC3 MRPS36P2-201ENST00000512569 299 ntBASIC6.06□□□□□ -1.44
RTN4Q9NQC3 SCARNA20.4-201ENST00000516969 131 ntBASIC6.06□□□□□ -1.44
RTN4Q9NQC3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.06□□□□□ -1.44
RTN4Q9NQC3 AL109918.3-201ENST00000603072 338 ntBASIC6.06□□□□□ -1.44
RTN4Q9NQC3 BPIFA4P-203ENST00000603168 689 ntBASIC6.06□□□□□ -1.44
RTN4Q9NQC3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC6.06□□□□□ -1.44
RTN4Q9NQC3 uc_338.7-201ENST00000621834 124 ntBASIC6.06□□□□□ -1.44
RTN4Q9NQC3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RTN4Q9NQC3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RTN4Q9NQC3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RTN4Q9NQC3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.05□□□□□ -1.44
RTN4Q9NQC3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 RNA5SP232-201ENST00000364144 119 ntBASIC6.05□□□□□ -1.44
RTN4Q9NQC3 SNORA40.19-201ENST00000390846 128 ntBASIC6.05□□□□□ -1.44
RTN4Q9NQC3 MIR1203-201ENST00000408812 85 ntBASIC6.05□□□□□ -1.44
RTN4Q9NQC3 RNA5SP146-201ENST00000410743 123 ntBASIC6.05□□□□□ -1.44
RTN4Q9NQC3 AC009963.1-201ENST00000417265 157 ntBASIC6.05□□□□□ -1.44
RTN4Q9NQC3 RPL7AP25-201ENST00000423357 805 ntBASIC6.05□□□□□ -1.44
RTN4Q9NQC3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 AC118758.1-202ENST00000454719 225 ntBASIC6.05□□□□□ -1.44
RTN4Q9NQC3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 BX005214.3-202ENST00000619809 325 ntBASIC6.05□□□□□ -1.44
RTN4Q9NQC3 AP001052.1-201ENST00000626421 99 ntBASIC6.05□□□□□ -1.44
RTN4Q9NQC3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.05□□□□□ -1.44
RTN4Q9NQC3 MAPK10-320ENST00000641462 6696 ntBASIC6.05□□□□□ -1.44
RTN4Q9NQC3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RTN4Q9NQC3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RTN4Q9NQC3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RTN4Q9NQC3 RN7SKP187-201ENST00000365536 330 ntBASIC6.04□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.418-201ENST00000384029 102 ntBASIC6.04□□□□□ -1.44
RTN4Q9NQC3 MIR621-201ENST00000384919 96 ntBASIC6.04□□□□□ -1.44
RTN4Q9NQC3 SNORA11.5-201ENST00000408163 128 ntBASIC6.04□□□□□ -1.44
RTN4Q9NQC3 MIR1275-201ENST00000408770 80 ntBASIC6.04□□□□□ -1.44
RTN4Q9NQC3 RPL19P1-201ENST00000411635 428 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 275.6 ms