Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC023194.1-201ENST00000493084 308 ntBASIC1.77□□□□□ -2.13
HMG20AQ9NP66 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.77□□□□□ -2.13
HMG20AQ9NP66 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.77□□□□□ -2.13
HMG20AQ9NP66 SNORD19.2-201ENST00000516978 73 ntBASIC1.77□□□□□ -2.13
HMG20AQ9NP66 ACA59.2-201ENST00000517061 156 ntBASIC1.77□□□□□ -2.13
HMG20AQ9NP66 MIR4765-201ENST00000585007 77 ntBASIC1.77□□□□□ -2.13
HMG20AQ9NP66 CLIC4P2-201ENST00000601934 717 ntBASIC1.77□□□□□ -2.13
HMG20AQ9NP66 AC090578.1-201ENST00000604955 591 ntBASIC1.77□□□□□ -2.13
HMG20AQ9NP66 AC012409.4-201ENST00000612923 249 ntBASIC1.77□□□□□ -2.13
HMG20AQ9NP66 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.77□□□□□ -2.13
HMG20AQ9NP66 MIR6873-201ENST00000622788 63 ntBASIC1.77□□□□□ -2.13
HMG20AQ9NP66 AC019226.2-201ENST00000625973 424 ntBASIC1.77□□□□□ -2.13
HMG20AQ9NP66 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
HMG20AQ9NP66 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC103710.2-202ENST00000641454 2853 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 RNU6-61P-201ENST00000365528 109 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 XGY1-201ENST00000381172 446 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 RNY3P10-201ENST00000384764 102 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 MIR578-201ENST00000384828 96 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 UBE2V1P2-201ENST00000397758 440 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 FTH1P15-201ENST00000406984 280 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 USP9YP6-201ENST00000413550 854 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AL160275.3-201ENST00000423876 471 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC092447.3-201ENST00000426027 686 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC137499.1-201ENST00000427602 88 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AL356320.1-201ENST00000429616 163 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 RPL31P35-201ENST00000431058 377 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 RPS6P15-201ENST00000431996 751 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC009961.2-201ENST00000435771 251 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 HMGB3P17-201ENST00000504195 649 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC112206.3-201ENST00000514578 389 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC010186.2-204ENST00000537668 439 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC008521.1-201ENST00000587471 187 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC174048.1-201ENST00000603389 144 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 SCARNA15.3-201ENST00000626315 122 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 AL157786.1-207ENST00000627771 695 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 SCARNA4.1-201ENST00000628597 123 ntBASIC1.76□□□□□ -2.13
HMG20AQ9NP66 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.76□□□□□ -2.13
HMG20AQ9NP66 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 RNU4-82P-201ENST00000362443 140 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 RNA5SP125-201ENST00000364843 120 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 MED13P1-201ENST00000428342 171 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC000111.3-201ENST00000433478 193 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 BTF3P15-201ENST00000455606 336 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 PPP1R2P5-201ENST00000457256 603 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 BET1P1-201ENST00000482276 359 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC117522.1-201ENST00000509821 380 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 SMURF2P1-201ENST00000514992 481 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 SCARNA3-201ENST00000517097 143 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 SNORA31.23-201ENST00000517219 133 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC090572.1-201ENST00000519251 160 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AL512310.1-201ENST00000548639 172 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 ADI1P3-201ENST00000549509 470 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC092325.1-201ENST00000566449 554 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC068276.1-201ENST00000605793 379 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC093648.1-201ENST00000623546 606 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 IGHVIII-44-202ENST00000636235 289 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 HSPA8P4-201ENST00000511877 1920 ntBASIC1.75□□□□□ -2.13
HMG20AQ9NP66 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMG20AQ9NP66 AC010329.5-201ENST00000623497 2174 ntBASIC1.74□□□□□ -2.13
HMG20AQ9NP66 RNU6-1140P-201ENST00000410517 106 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms