Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC245389.1-201ENST00000605141 529 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 Z82243.1-201ENST00000609432 473 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 AC092794.1-201ENST00000612734 582 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 uc_338.14-201ENST00000613162 166 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 AC007014.2-201ENST00000615581 479 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 MIR6810-201ENST00000622701 70 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 AL109809.4-201ENST00000603520 2185 ntBASIC2.63□□□□□ -1.99
CHMP1AQ9HD42 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 AL161912.2-201ENST00000565707 3007 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 RNU6-461P-201ENST00000364195 107 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 Y_RNA.295-201ENST00000364918 102 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 SNORA62.3-201ENST00000365110 153 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 SET-203ENST00000372688 801 ntTSL 2 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 RNU6-843P-201ENST00000384454 104 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 SNORD116-20-201ENST00000384529 92 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 MIR200C-201ENST00000384980 68 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 RN7SKP220-201ENST00000410611 288 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 Y_RNA.615-201ENST00000410769 117 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 SNORD56-201ENST00000413522 71 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 RPS3AP44-201ENST00000425466 790 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 Z98742.2-201ENST00000431564 187 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 AC005019.1-201ENST00000436455 431 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 AL671855.1-201ENST00000446875 1203 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 HMGN2P26-201ENST00000463169 339 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 MTCYBP40-201ENST00000509390 1135 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 RNU5B-3P-201ENST00000516601 115 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 MIR2682-201ENST00000580305 110 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 AC023043.3-201ENST00000593113 385 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 AP000787.2-201ENST00000604432 568 ntBASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHMP1AQ9HD42 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 RBBP8P1-201ENST00000449447 1844 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 RNU5E-7P-201ENST00000365290 117 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 SNORD88.1-201ENST00000408684 91 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 NUP35P1-201ENST00000422734 947 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 RN7SL542P-201ENST00000467147 294 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 AP001025.1-201ENST00000486139 332 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 RN7SL633P-201ENST00000488974 297 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 AIG1P1-201ENST00000503376 148 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 Y_RNA.665-201ENST00000516177 98 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 SNORA31.23-201ENST00000517219 133 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 AC026241.1-201ENST00000517873 2142 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 CYCSP27-201ENST00000527643 293 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 MIR4446-201ENST00000578505 67 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 AC103810.1-201ENST00000579873 453 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 BNIP3P25-201ENST00000596023 559 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 AL020997.2-201ENST00000602607 184 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 AL121917.1-203ENST00000605534 577 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 U4.7-201ENST00000638126 106 ntBASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHMP1AQ9HD42 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AC138393.1-203ENST00000327086 343 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 SNORD15B-201ENST00000384714 146 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 Y_RNA.573-201ENST00000384763 105 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 MIR627-201ENST00000384979 97 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 RNU6-332P-201ENST00000391193 108 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 MIR1277-201ENST00000408536 78 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 RNU6-1140P-201ENST00000410517 106 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AC074117.2-201ENST00000417130 397 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms