Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AL049555.1-201ENST00000562834 1933 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 RNU6-595P-201ENST00000363944 107 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 RNU6-1062P-201ENST00000383908 107 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 RNU6-1179P-201ENST00000384667 107 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 U3.42-201ENST00000408746 214 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AL592045.1-201ENST00000429867 352 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 MYL8P-204ENST00000431574 518 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 RBMY2UP-201ENST00000453474 324 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 U3.44-201ENST00000458938 192 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 RPL39P38-201ENST00000467018 153 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AC034114.1-201ENST00000520293 285 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AC068446.3-201ENST00000555285 382 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AC090517.1-201ENST00000569307 266 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AC004584.2-201ENST00000570407 410 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AL158827.2-201ENST00000602494 330 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AC098826.3-201ENST00000603823 466 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AC123912.5-201ENST00000605470 343 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AC098479.1-201ENST00000609225 154 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AC138627.2-201ENST00000624202 601 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AL691447.3-201ENST00000635020 330 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 AL512643.1-201ENST00000635735 524 ntBASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BCAS3Q9H6U6 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 RNU4-35P-201ENST00000362588 141 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 Y_RNA.33-201ENST00000362591 102 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 RNU5A-1-201ENST00000362698 116 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 Y_RNA.60-201ENST00000362831 98 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 RNU1-18P-201ENST00000363062 164 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 RNU6-933P-201ENST00000384424 107 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 Y_RNA.515-201ENST00000384535 112 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 RNU2-38P-201ENST00000410856 79 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 AC092573.2-201ENST00000434546 243 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 SNORD105B-201ENST00000458770 79 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 AC133134.1-201ENST00000466800 359 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 FO393415.2-201ENST00000480085 343 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 RPL30P10-201ENST00000488148 337 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 VWA8P1-201ENST00000510889 176 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 Y_RNA.700-201ENST00000516806 100 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 RNU6-143P-201ENST00000516942 93 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 RNA5SP471-201ENST00000516971 106 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 RNU6-897P-201ENST00000517135 105 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 SNORD84-203ENST00000584275 78 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 AL390123.1-201ENST00000603216 237 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 AL161798.1-201ENST00000604630 131 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 MIR486-1-201ENST00000612171 68 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 MIR4727-201ENST00000622232 55 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 AC130454.1-201ENST00000622948 401 ntBASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.03□□□□□ -1.76
BCAS3Q9H6U6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.03□□□□□ -1.77
BCAS3Q9H6U6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.77
BCAS3Q9H6U6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 MIR412-201ENST00000362142 91 ntBASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 Y_RNA.26-201ENST00000362539 101 ntBASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 Y_RNA.48-201ENST00000362710 103 ntBASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 RNU6-1167P-201ENST00000363227 94 ntBASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 SNORA20.1-201ENST00000364790 130 ntBASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 RNU6-384P-201ENST00000364900 104 ntBASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 Y_RNA.785-201ENST00000384290 109 ntBASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 SNORD17-201ENST00000390930 237 ntBASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 RNU4-61P-201ENST00000411243 107 ntBASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 RN7SL93P-201ENST00000463035 293 ntBASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.02□□□□□ -1.77
BCAS3Q9H6U6 SNORA40.15-201ENST00000516884 107 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms