Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RN7SL93P-201ENST00000463035 293 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 HMGB1P35-201ENST00000503360 598 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 RNU6-1256P-201ENST00000516539 103 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 RNU6-612P-201ENST00000516909 102 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 HMGB1P14-201ENST00000557424 591 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 MIR4429-201ENST00000580105 73 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AC006130.2-201ENST00000586202 326 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AC008121.1-201ENST00000603244 268 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 SRGNP1-201ENST00000603392 451 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AP001282.2-201ENST00000616149 309 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 Z75746.1-201ENST00000440243 2080 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AL353746.1-201ENST00000566293 6881 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 U3.6-201ENST00000363622 211 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 RNA5SP130-201ENST00000364431 114 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 RNU6-335P-201ENST00000364563 113 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 Y_RNA.416-201ENST00000384014 113 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 MIR10A-201ENST00000385043 110 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 MIR548H3-201ENST00000408771 118 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 RNU6-1203P-201ENST00000410703 110 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 RNU2-25P-201ENST00000411041 191 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 TOMM20P4-201ENST00000427861 435 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 AL358472.1-201ENST00000431295 329 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 HMGN2P7-201ENST00000456186 273 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 RN7SKP210-201ENST00000459176 261 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 SNORD108-201ENST00000459332 71 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 HMGB1P22-201ENST00000505315 124 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 AC067942.3-201ENST00000512025 362 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 AC026726.1-201ENST00000512859 601 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 AC099522.1-202ENST00000514718 367 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 AC025755.1-201ENST00000521306 278 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 AL590705.4-201ENST00000532209 134 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 AC004024.1-201ENST00000549244 247 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 MED28P6-201ENST00000558776 231 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 AC006557.5-201ENST00000603126 811 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 AC005046.1-201ENST00000608515 625 ntBASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXP3Q9BZS1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 RLIMP1-201ENST00000339626 1680 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 MIR335-201ENST00000362173 94 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 Y_RNA.84-201ENST00000363011 104 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 SNORD6-201ENST00000365444 73 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 Y_RNA.458-201ENST00000384240 102 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 Y_RNA.785-201ENST00000384290 109 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 SNORA40C-201ENST00000391285 128 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 MTND3P9-201ENST00000429526 346 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 AC004383.1-201ENST00000438135 289 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 RPS29P27-201ENST00000463711 170 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 RN7SL132P-201ENST00000478131 296 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 AK3P2-201ENST00000507976 429 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 AL359273.1-201ENST00000510918 627 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 MIR2114-201ENST00000516645 80 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 RNA5SP290-201ENST00000517133 127 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 RNU1-45P-201ENST00000517191 141 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 AC091144.1-201ENST00000519573 138 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 AC022080.3-201ENST00000544433 482 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 MIR5684-201ENST00000585074 65 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 MIR6875-201ENST00000617506 72 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 AC034229.5-201ENST00000624258 185 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 AP001486.2-201ENST00000561652 5113 ntBASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.13□□□□□ -1.75
FOXP3Q9BZS1 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 SNORD35B-201ENST00000363660 87 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 RPL21P65-201ENST00000406094 466 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 RNU2-33P-201ENST00000410344 192 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 SDAD1P3-201ENST00000427380 333 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 AL356867.1-201ENST00000429623 299 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms