Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 SNORA31.25-201ENST00000517242 134 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.33□□□□□ -2.2
SCAF11Q99590 DEFB130C-202ENST00000530001 230 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 OR6C7P-201ENST00000547875 934 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 AC087897.1-201ENST00000550134 156 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 MTCYBP23-201ENST00000558717 1102 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 AL353997.4-201ENST00000586196 166 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 AF038458.1-201ENST00000588406 262 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 AC068276.1-201ENST00000605793 379 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 AL121652.1-201ENST00000608851 448 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 uc_338.14-201ENST00000613162 166 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 AC107075.1-201ENST00000613695 314 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 TUG1_2.1-201ENST00000614234 87 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 AL627230.5-201ENST00000619807 58 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 AC079416.3-201ENST00000624479 549 ntBASIC1.33□□□□□ -2.2
SCAF11Q99590 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.33□□□□□ -2.2
SCAF11Q99590 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SCAF11Q99590 RNU6-432P-201ENST00000384196 109 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 AL356421.1-201ENST00000403255 413 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.32□□□□□ -2.2
SCAF11Q99590 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 C1DP1-201ENST00000426049 402 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 RPL31P35-201ENST00000431058 377 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 NANOGP2-201ENST00000435391 727 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 PTGES3P1-201ENST00000439531 483 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.32□□□□□ -2.2
SCAF11Q99590 RPL23AP6-201ENST00000446637 472 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 AC107032.1-201ENST00000485945 480 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 HMGB1P36-201ENST00000487709 576 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.32□□□□□ -2.2
SCAF11Q99590 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.32□□□□□ -2.2
SCAF11Q99590 RNU2-19P-201ENST00000517288 84 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 MTCO2P15-201ENST00000532655 656 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 MIR4698-201ENST00000577795 80 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.32□□□□□ -2.2
SCAF11Q99590 MIR3167-201ENST00000579623 85 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.32□□□□□ -2.2
SCAF11Q99590 AC069545.1-201ENST00000605671 358 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 AC008759.3-201ENST00000613300 508 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 MIR2909-201ENST00000617113 69 ntBASIC1.32□□□□□ -2.2
SCAF11Q99590 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SCAF11Q99590 MTND4P12-201ENST00000498999 1377 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 AL512604.1-201ENST00000404812 257 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 RNA5SP127-201ENST00000411051 133 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 UBE2FP1-201ENST00000416536 447 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.31□□□□□ -2.2
SCAF11Q99590 AC004941.2-201ENST00000427009 228 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.31□□□□□ -2.2
SCAF11Q99590 AC098934.3-201ENST00000430450 190 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.31□□□□□ -2.2
SCAF11Q99590 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SCAF11Q99590 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SCAF11Q99590 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.31□□□□□ -2.2
SCAF11Q99590 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.31□□□□□ -2.2
SCAF11Q99590 AC007490.1-201ENST00000624321 703 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SCAF11Q99590 AC018630.2-201ENST00000534866 2403 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 AL359854.1-201ENST00000614203 1594 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 ZNF702P-202ENST00000434269 1966 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SCAF11Q99590 MTCO1P56-201ENST00000401674 224 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 RNU2-41P-201ENST00000410991 178 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 AC068533.2-201ENST00000411872 306 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.31□□□□□ -2.2
SCAF11Q99590 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.31□□□□□ -2.2
SCAF11Q99590 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.31□□□□□ -2.2
SCAF11Q99590 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.31□□□□□ -2.2
SCAF11Q99590 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.31□□□□□ -2.2
SCAF11Q99590 MTND1P28-201ENST00000435623 950 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 COX7BP2-201ENST00000437976 242 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 MTND5P14-201ENST00000441481 1267 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.31□□□□□ -2.2
SCAF11Q99590 AC013267.1-201ENST00000458227 267 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 AC093752.1-206ENST00000511823 336 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.31□□□□□ -2.2
SCAF11Q99590 RNU6-390P-201ENST00000516259 103 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 RNA5SP165-201ENST00000517142 115 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 AP003355.1-201ENST00000518956 587 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.31□□□□□ -2.2
SCAF11Q99590 RRN3P3-201ENST00000549207 578 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.31□□□□□ -2.2
SCAF11Q99590 AC104072.1-201ENST00000568817 668 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.31□□□□□ -2.2
SCAF11Q99590 AC005034.5-201ENST00000604219 466 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 AC009237.15-201ENST00000610252 501 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 AL356094.1-201ENST00000624663 1212 ntBASIC1.31□□□□□ -2.2
SCAF11Q99590 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
SCAF11Q99590 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SCAF11Q99590 RNU6-486P-201ENST00000363116 107 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.3□□□□□ -2.2
SCAF11Q99590 Y_RNA.408-201ENST00000383987 102 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 RNU6-19P-201ENST00000384718 107 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 RPL26P27-201ENST00000414397 437 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.3□□□□□ -2.2
SCAF11Q99590 MTND1P31-201ENST00000449206 961 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.3□□□□□ -2.2
SCAF11Q99590 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.3□□□□□ -2.2
SCAF11Q99590 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.3□□□□□ -2.2
SCAF11Q99590 MTND5P13-201ENST00000513046 1079 ntBASIC1.3□□□□□ -2.2
SCAF11Q99590 RNA5SP112-201ENST00000515937 99 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms