Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
SNX18Q96RF0 MTND5P30-201ENST00000452896 1731 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX18Q96RF0 MTND4P1-201ENST00000457501 1466 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 FTLP6-201ENST00000355274 422 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 Y_RNA.5-201ENST00000362334 102 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-37P-201ENST00000362692 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-11P-201ENST00000364234 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 SNORD14B-201ENST00000364533 90 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-7-201ENST00000364784 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-8-201ENST00000365467 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-25P-201ENST00000383873 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-1-201ENST00000383898 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-639P-201ENST00000384074 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-48P-201ENST00000384161 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-36P-201ENST00000384172 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-4P-201ENST00000384205 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-5P-201ENST00000384238 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-3P-201ENST00000384314 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-16P-201ENST00000384385 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-15P-201ENST00000384534 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-2-201ENST00000384627 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-29P-201ENST00000384637 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-9-201ENST00000384776 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-33P-201ENST00000384793 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 SNORA40C-201ENST00000391285 128 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 SNORA75.6-201ENST00000391318 127 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 AL627311.1-201ENST00000431514 115 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 FTH1P25-201ENST00000447665 469 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RPS3AP46-201ENST00000448352 682 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 NDUFB1P2-201ENST00000449477 176 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 PCMTD1P1-201ENST00000455560 355 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RPL12P25-201ENST00000455592 494 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.25□□□□□ -1.89
SNX18Q96RF0 AL133162.1-201ENST00000463228 453 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RN7SL283P-201ENST00000489055 303 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-976P-201ENST00000516086 111 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 SCARNA16.2-201ENST00000516520 172 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNA5SP384-201ENST00000516615 116 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-572P-201ENST00000516724 80 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RN7SKP295-201ENST00000517264 153 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-988P-201ENST00000519081 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 AP006245.1-201ENST00000522549 120 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.25□□□□□ -1.89
SNX18Q96RF0 SYF2P1-201ENST00000550658 413 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.25□□□□□ -1.89
SNX18Q96RF0 AL121917.1-203ENST00000605534 577 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 RNU6-6P-201ENST00000606623 107 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 FTX_3.1-201ENST00000610451 147 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.25□□□□□ -1.89
SNX18Q96RF0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX18Q96RF0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX18Q96RF0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SNX18Q96RF0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX18Q96RF0 AC118273.1-201ENST00000525324 3006 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 MAPK10-362ENST00000641864 4484 ntBASIC3.25□□□□□ -1.89
SNX18Q96RF0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX18Q96RF0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX18Q96RF0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX18Q96RF0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX18Q96RF0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX18Q96RF0 RNU6-217P-201ENST00000384164 104 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 RNU6-842P-201ENST00000384269 107 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 U8.11-201ENST00000384699 133 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 U8.12-201ENST00000384701 133 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 MIR7-3-201ENST00000384898 110 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 MIR10A-201ENST00000385043 110 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 AL030996.1-201ENST00000411430 235 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 AL139247.1-201ENST00000422768 325 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX18Q96RF0 USMG5P1-201ENST00000425964 177 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 AC093151.1-201ENST00000427711 313 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 TOMM20P4-201ENST00000427861 435 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 RNA5SP310-201ENST00000459084 116 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 U8.18-201ENST00000459285 133 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 snoU13.22-201ENST00000459428 104 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 RPL7P49-201ENST00000471402 708 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX18Q96RF0 PTP4A1P4-201ENST00000512479 322 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 Y_RNA.661-201ENST00000516003 99 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 RNU6-120P-201ENST00000516077 103 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 RNU2-27P-201ENST00000516185 142 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX18Q96RF0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX18Q96RF0 AC008737.2-201ENST00000599446 118 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 U6.99-201ENST00000637524 83 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX18Q96RF0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SNX18Q96RF0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNX18Q96RF0 AC007256.1-201ENST00000392253 2765 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX18Q96RF0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX18Q96RF0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX18Q96RF0 FAM35BP-202ENST00000497389 3337 ntBASIC3.24□□□□□ -1.89
SNX18Q96RF0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SNX18Q96RF0 CUL1P1-201ENST00000509510 2425 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms