Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL353748.2-201ENST00000622148 471 ntBASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 MIR412-201ENST00000362142 91 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.274-201ENST00000364714 101 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 RNU6-384P-201ENST00000364900 104 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 MIR10A-201ENST00000385043 110 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 IFNWP4-201ENST00000453148 294 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 RN7SL585P-201ENST00000470538 280 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 RPL23AP45-201ENST00000476406 468 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 AC006517.1-201ENST00000480485 328 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 SNORD116-26-201ENST00000516006 96 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.700-201ENST00000516806 100 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 RNU6-612P-201ENST00000516909 102 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 RNA5SP179-201ENST00000517284 121 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 AC022080.3-201ENST00000544433 482 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 AC087499.8-201ENST00000578406 226 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 AP000787.2-201ENST00000604432 568 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 MIR3651-201ENST00000630427 90 ntBASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNGAP1Q96PV0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 SNORD35B-201ENST00000363660 87 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.352-201ENST00000365439 102 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 U8.11-201ENST00000384699 133 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 U8.12-201ENST00000384701 133 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 MIR514A1-201ENST00000385133 98 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 RNU2-20P-201ENST00000410425 191 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.602-201ENST00000410535 92 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 RNU2-14P-201ENST00000411053 191 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 AL592148.1-201ENST00000413568 445 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 RPS6P12-201ENST00000432491 726 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 AC104332.1-201ENST00000440471 797 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 PIGFP3-201ENST00000441918 722 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 U8.18-201ENST00000459285 133 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 AC010469.2-201ENST00000496412 480 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 AL139395.1-201ENST00000603662 160 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 AC091167.4-201ENST00000605079 184 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 FTX_2.1-201ENST00000618816 94 ntBASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SYNGAP1Q96PV0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 U3.6-201ENST00000363622 211 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.269-201ENST00000364685 89 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 RNA5SP235-201ENST00000365411 114 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.405-201ENST00000383979 100 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.451-201ENST00000384200 100 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.524-201ENST00000384564 100 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.561-201ENST00000384694 100 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 U3.26-201ENST00000391236 204 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 MIR190B-201ENST00000401119 79 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 SNORA3.3-201ENST00000408712 125 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 AC007560.1-201ENST00000426912 237 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 AC007919.1-201ENST00000429380 217 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 AL138752.1-201ENST00000452964 351 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 RPL30P10-201ENST00000488148 337 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 AC067942.3-201ENST00000512025 362 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 SYF2P1-201ENST00000550658 413 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 AC006077.1-201ENST00000604746 343 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 AC073657.2-201ENST00000605661 303 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 AC009318.2-201ENST00000610917 651 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 AL161629.2-201ENST00000615347 275 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 MIR7975-201ENST00000619350 68 ntBASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms