Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 AC012676.2-201ENST00000619258 186 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AP003485.1-201ENST00000625093 753 ntBASIC0.83□□□□□ -2.28
CCDC115Q96NT0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC115Q96NT0 AC233981.2-201ENST00000611524 1614 ntBASIC0.82□□□□□ -2.28
CCDC115Q96NT0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CCDC115Q96NT0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.82□□□□□ -2.28
CCDC115Q96NT0 Y_RNA.99-201ENST00000363138 105 ntBASIC0.82□□□□□ -2.28
CCDC115Q96NT0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CCDC115Q96NT0 RNU6-932P-201ENST00000391108 106 ntBASIC0.82□□□□□ -2.28
CCDC115Q96NT0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC115Q96NT0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC115Q96NT0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC115Q96NT0 AC023194.1-201ENST00000493084 308 ntBASIC0.82□□□□□ -2.28
CCDC115Q96NT0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC115Q96NT0 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC115Q96NT0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC115Q96NT0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC115Q96NT0 TRAV32-201ENST00000553993 340 ntBASIC0.82□□□□□ -2.28
CCDC115Q96NT0 AC073410.2-201ENST00000603240 332 ntBASIC0.82□□□□□ -2.28
CCDC115Q96NT0 AC013470.4-201ENST00000619978 986 ntBASIC0.82□□□□□ -2.28
CCDC115Q96NT0 U6.99-201ENST00000637524 83 ntBASIC0.82□□□□□ -2.28
CCDC115Q96NT0 ICE2P2-201ENST00000483823 2787 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 RNA5SP327-201ENST00000362494 101 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 RNU6-216P-201ENST00000363282 104 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 RNU6-97P-201ENST00000363387 104 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 SNORA29-201ENST00000384183 140 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 RN7SKP61-201ENST00000410642 295 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC115Q96NT0 UBE2V2P3-201ENST00000433562 437 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 MTCO3P45-201ENST00000443036 613 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 AC079140.2-201ENST00000506193 142 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 ARL2BPP4-201ENST00000506854 471 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC115Q96NT0 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 RNA5SP404-201ENST00000517118 132 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.81□□□□□ -2.28
CCDC115Q96NT0 SUB1P4-201ENST00000566062 339 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 AL583856.2-201ENST00000606298 543 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 AC008759.3-201ENST00000613300 508 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 AL357080.1-201ENST00000617394 239 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 MIR8063-201ENST00000621930 81 ntBASIC0.81□□□□□ -2.28
CCDC115Q96NT0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC115Q96NT0 AL391516.1-201ENST00000554380 2449 ntBASIC0.8□□□□□ -2.28
CCDC115Q96NT0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC115Q96NT0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
CCDC115Q96NT0 RNU6-1080P-201ENST00000383982 107 ntBASIC0.8□□□□□ -2.28
CCDC115Q96NT0 RNU6-432P-201ENST00000384196 109 ntBASIC0.8□□□□□ -2.28
CCDC115Q96NT0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC115Q96NT0 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC115Q96NT0 BX119904.4-201ENST00000424402 301 ntBASIC0.8□□□□□ -2.28
CCDC115Q96NT0 BRK1P2-201ENST00000442875 223 ntBASIC0.8□□□□□ -2.28
CCDC115Q96NT0 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.8□□□□□ -2.28
CCDC115Q96NT0 AC108729.2-201ENST00000476543 840 ntBASIC0.8□□□□□ -2.28
CCDC115Q96NT0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC115Q96NT0 HMGN1P13-201ENST00000505795 138 ntBASIC0.8□□□□□ -2.28
CCDC115Q96NT0 UBL5P1-201ENST00000507979 193 ntBASIC0.8□□□□□ -2.28
CCDC115Q96NT0 RNU2-53P-201ENST00000516257 147 ntBASIC0.8□□□□□ -2.28
CCDC115Q96NT0 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.8□□□□□ -2.28
CCDC115Q96NT0 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC115Q96NT0 AC004908.3-201ENST00000610248 625 ntBASIC0.8□□□□□ -2.28
CCDC115Q96NT0 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
CCDC115Q96NT0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC115Q96NT0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
CCDC115Q96NT0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
CCDC115Q96NT0 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC115Q96NT0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC115Q96NT0 AC114878.1-201ENST00000441166 358 ntBASIC0.79□□□□□ -2.28
CCDC115Q96NT0 RPL23AP35-201ENST00000451906 501 ntBASIC0.79□□□□□ -2.28
CCDC115Q96NT0 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC115Q96NT0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC115Q96NT0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC115Q96NT0 RNU6-390P-201ENST00000516259 103 ntBASIC0.79□□□□□ -2.28
CCDC115Q96NT0 SNORA31.16-201ENST00000516773 139 ntBASIC0.79□□□□□ -2.28
CCDC115Q96NT0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC115Q96NT0 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC115Q96NT0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC115Q96NT0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC115Q96NT0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC115Q96NT0 MIR4782-201ENST00000577987 79 ntBASIC0.79□□□□□ -2.28
CCDC115Q96NT0 MIR4781-201ENST00000585250 76 ntBASIC0.79□□□□□ -2.28
CCDC115Q96NT0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC115Q96NT0 AC008993.2-201ENST00000631744 806 ntBASIC0.79□□□□□ -2.28
CCDC115Q96NT0 AL133216.2-202ENST00000634512 349 ntBASIC0.79□□□□□ -2.28
CCDC115Q96NT0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
CCDC115Q96NT0 RNU6-23P-201ENST00000363283 107 ntBASIC0.78□□□□□ -2.28
CCDC115Q96NT0 RNU6-26P-201ENST00000383985 107 ntBASIC0.78□□□□□ -2.28
CCDC115Q96NT0 RNU6-1274P-201ENST00000384557 107 ntBASIC0.78□□□□□ -2.28
CCDC115Q96NT0 MIR222-201ENST00000384992 110 ntBASIC0.78□□□□□ -2.28
CCDC115Q96NT0 AC119751.3-201ENST00000399720 670 ntBASIC0.78□□□□□ -2.28
CCDC115Q96NT0 AL139397.2-201ENST00000404529 772 ntBASIC0.78□□□□□ -2.28
CCDC115Q96NT0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.78□□□□□ -2.28
CCDC115Q96NT0 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.78□□□□□ -2.28
CCDC115Q96NT0 COX7BP2-201ENST00000437976 242 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms