Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
CFAP54Q96N23 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC-0.1□□□□□ -2.43
CFAP54Q96N23 AC106900.2-201ENST00000604994 317 ntBASIC-0.1□□□□□ -2.43
CFAP54Q96N23 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.1□□□□□ -2.43
CFAP54Q96N23 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
CFAP54Q96N23 AC090625.1-201ENST00000357130 210 ntBASIC-0.11□□□□□ -2.43
CFAP54Q96N23 SNORA32.1-201ENST00000364514 115 ntBASIC-0.11□□□□□ -2.43
CFAP54Q96N23 AC092634.6-201ENST00000418558 192 ntBASIC-0.11□□□□□ -2.43
CFAP54Q96N23 PTGES3P4-201ENST00000426243 356 ntBASIC-0.11□□□□□ -2.43
CFAP54Q96N23 RPL23AP33-201ENST00000442301 452 ntBASIC-0.11□□□□□ -2.43
CFAP54Q96N23 CIR1P1-201ENST00000524055 1133 ntBASIC-0.11□□□□□ -2.43
CFAP54Q96N23 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC-0.11□□□□□ -2.43
CFAP54Q96N23 AC025588.2-201ENST00000604851 466 ntBASIC-0.11□□□□□ -2.43
CFAP54Q96N23 UCA1.1-201ENST00000620952 75 ntBASIC-0.11□□□□□ -2.43
CFAP54Q96N23 HMGB1P29-201ENST00000505659 499 ntBASIC-0.11□□□□□ -2.43
CFAP54Q96N23 RNU6-964P-201ENST00000516524 69 ntBASIC-0.11□□□□□ -2.43
CFAP54Q96N23 AC007751.1-201ENST00000529260 376 ntBASIC-0.11□□□□□ -2.43
CFAP54Q96N23 SNORA16.2-201ENST00000390991 127 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.12□□□□□ -2.43
CFAP54Q96N23 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC-0.12□□□□□ -2.43
CFAP54Q96N23 RPS15AP27-201ENST00000449183 343 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 RPL7P43-201ENST00000478876 753 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC-0.12□□□□□ -2.43
CFAP54Q96N23 SNORD116-28-201ENST00000516123 91 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC-0.12□□□□□ -2.43
CFAP54Q96N23 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC-0.12□□□□□ -2.43
CFAP54Q96N23 AL079343.1-201ENST00000572358 1771 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 RNA5SP222-201ENST00000411039 105 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 AC010469.2-201ENST00000496412 480 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 MTCYBP16-201ENST00000509187 1129 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 MIR892C-201ENST00000516410 77 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 AC107953.1-201ENST00000522216 297 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 RAB11AP2-201ENST00000545905 639 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 AL590282.1-201ENST00000610379 1136 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.12□□□□□ -2.43
CFAP54Q96N23 MIR605-201ENST00000385078 83 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
CFAP54Q96N23 CETN4P-201ENST00000432407 469 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 SNRPGP6-201ENST00000451124 220 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 RPL26P26-201ENST00000480251 434 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 AC108740.1-201ENST00000498629 225 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC-0.12□□□□□ -2.43
CFAP54Q96N23 AC021506.2-201ENST00000612354 169 ntBASIC-0.12□□□□□ -2.43
CFAP54Q96N23 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC-0.12□□□□□ -2.43
CFAP54Q96N23 ZNF680P1-201ENST00000436625 1469 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 AL513185.3-201ENST00000433335 1300 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 MIR424-201ENST00000362227 98 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 RNU4-45P-201ENST00000365469 141 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.13□□□□□ -2.43
CFAP54Q96N23 AC113194.1-201ENST00000606037 500 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 AC091304.9-201ENST00000612091 226 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 AL138478.1-201ENST00000612252 832 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 AC016716.1-201ENST00000265882 708 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 SNORA29-201ENST00000384183 140 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 MIR1285-2-201ENST00000408311 88 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.13□□□□□ -2.43
CFAP54Q96N23 AC245047.7-201ENST00000440265 293 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 TPMTP4-201ENST00000450749 678 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 BX248409.1-201ENST00000455497 255 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC-0.13□□□□□ -2.43
CFAP54Q96N23 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.13□□□□□ -2.43
CFAP54Q96N23 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC-0.13□□□□□ -2.43
CFAP54Q96N23 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.14□□□□□ -2.43
CFAP54Q96N23 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC-0.14□□□□□ -2.43
CFAP54Q96N23 RNU6-338P-201ENST00000383888 105 ntBASIC-0.14□□□□□ -2.43
CFAP54Q96N23 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC-0.14□□□□□ -2.43
CFAP54Q96N23 AC098614.2-201ENST00000426040 255 ntBASIC-0.14□□□□□ -2.43
CFAP54Q96N23 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC-0.14□□□□□ -2.43
CFAP54Q96N23 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC-0.14□□□□□ -2.43
CFAP54Q96N23 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.14□□□□□ -2.43
CFAP54Q96N23 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC-0.14□□□□□ -2.43
CFAP54Q96N23 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.14□□□□□ -2.43
CFAP54Q96N23 MIR4315-1-201ENST00000636800 73 ntBASIC-0.14□□□□□ -2.43
CFAP54Q96N23 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC-0.14□□□□□ -2.43
CFAP54Q96N23 MIR4315-2-201ENST00000640925 73 ntBASIC-0.14□□□□□ -2.43
CFAP54Q96N23 RNU4-12P-201ENST00000365233 139 ntBASIC-0.14□□□□□ -2.43
CFAP54Q96N23 AL138880.1-201ENST00000405824 642 ntBASIC-0.14□□□□□ -2.43
CFAP54Q96N23 AL590556.1-201ENST00000423231 483 ntBASIC-0.14□□□□□ -2.43
CFAP54Q96N23 AC104651.1-201ENST00000427559 735 ntBASIC-0.14□□□□□ -2.43
CFAP54Q96N23 MIR4290-201ENST00000583807 95 ntBASIC-0.14□□□□□ -2.43
CFAP54Q96N23 AP003399.1-201ENST00000637534 361 ntBASIC-0.14□□□□□ -2.43
CFAP54Q96N23 U3.20-201ENST00000390909 217 ntBASIC-0.15□□□□□ -2.43
CFAP54Q96N23 ZNF736P11Y-201ENST00000442535 1213 ntBASIC-0.15□□□□□ -2.43
CFAP54Q96N23 AC022493.2-201ENST00000506122 481 ntBASIC-0.15□□□□□ -2.43
CFAP54Q96N23 AC010186.2-204ENST00000537668 439 ntBASIC-0.15□□□□□ -2.43
CFAP54Q96N23 AL136520.1-202ENST00000555494 763 ntBASIC-0.15□□□□□ -2.43
CFAP54Q96N23 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC-0.15□□□□□ -2.43
CFAP54Q96N23 MIR4320-201ENST00000636981 65 ntBASIC-0.15□□□□□ -2.43
CFAP54Q96N23 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
CFAP54Q96N23 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.15□□□□□ -2.43
CFAP54Q96N23 AP000797.1-201ENST00000478870 387 ntBASIC-0.15□□□□□ -2.43
CFAP54Q96N23 MRPS36P2-201ENST00000512569 299 ntBASIC-0.15□□□□□ -2.43
CFAP54Q96N23 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.15□□□□□ -2.43
CFAP54Q96N23 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC-0.15□□□□□ -2.43
CFAP54Q96N23 AC008121.1-201ENST00000603244 268 ntBASIC-0.15□□□□□ -2.43
CFAP54Q96N23 AC092354.1-201ENST00000606057 376 ntBASIC-0.15□□□□□ -2.43
CFAP54Q96N23 AL158163.2-201ENST00000619110 700 ntBASIC-0.15□□□□□ -2.43
CFAP54Q96N23 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC-0.15□□□□□ -2.43
CFAP54Q96N23 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms