Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 AC092798.1-201ENST00000458542 409 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 HMGB1P30-201ENST00000492455 606 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 AC092436.3-201ENST00000511788 257 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 SNORA70.19-201ENST00000516717 90 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 SNORA70.24-201ENST00000517233 118 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 AL133255.1-201ENST00000606374 441 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 AC096577.2-201ENST00000611455 153 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 AL138880.2-201ENST00000616214 239 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 AC138627.2-201ENST00000624202 601 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS50Q96JG6 MTND4LP32-201ENST00000636111 270 ntBASIC3.31□□□□□ -1.88
VPS50Q96JG6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS50Q96JG6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
VPS50Q96JG6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS50Q96JG6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
VPS50Q96JG6 RNA5SP387-201ENST00000364226 106 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 Y_RNA.387-201ENST00000383918 102 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 MIR10A-201ENST00000385043 110 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS50Q96JG6 RN7SKP158-201ENST00000410453 326 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 AC244505.4-201ENST00000434905 287 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 AL359672.1-201ENST00000442302 409 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 SSXP5-201ENST00000443473 287 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 AC107399.1-201ENST00000451226 265 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 RN7SL594P-201ENST00000470590 287 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 RPL21P13-201ENST00000488305 481 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 RPS27P27-201ENST00000498779 255 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 AC006445.2-201ENST00000510061 472 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 FCF1P8-201ENST00000510322 597 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.3□□□□□ -1.88
VPS50Q96JG6 RNU6-559P-201ENST00000516151 98 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 AC087854.1-201ENST00000519706 414 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 AC104576.1-201ENST00000524225 88 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS50Q96JG6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.3□□□□□ -1.88
VPS50Q96JG6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS50Q96JG6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS50Q96JG6 MIR4719-201ENST00000585233 84 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 AC044792.1-201ENST00000593294 196 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 HSPE1P7-201ENST00000604681 321 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 ELOCP5-201ENST00000604924 333 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 AL627309.6-201ENST00000606857 840 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 AC004832.5-201ENST00000608677 401 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 U2.21-201ENST00000637295 81 ntBASIC3.3□□□□□ -1.88
VPS50Q96JG6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS50Q96JG6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VPS50Q96JG6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS50Q96JG6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
VPS50Q96JG6 RNU4-76P-201ENST00000364509 141 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 Y_RNA.384-201ENST00000383909 102 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 SNORD116-29-201ENST00000384516 83 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 RNU6-95P-201ENST00000384697 107 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 MIR483-201ENST00000385070 76 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 RPL37P10-201ENST00000412884 288 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS50Q96JG6 RPL23AP82-202ENST00000427528 469 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS50Q96JG6 snoU109.2-201ENST00000459316 135 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 RNU7-138P-201ENST00000459479 64 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 CENPBD1P1-201ENST00000464061 469 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 RPS29P20-201ENST00000489592 171 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 RNU1-103P-201ENST00000516502 125 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 AC107934.2-201ENST00000518653 310 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.29□□□□□ -1.88
VPS50Q96JG6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS50Q96JG6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS50Q96JG6 DNAJC8P1-201ENST00000554535 372 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS50Q96JG6 AC007151.1-201ENST00000572774 483 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 MIR5195-201ENST00000583555 115 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS50Q96JG6 AC064836.2-201ENST00000609491 462 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 AC090574.1-201ENST00000623186 233 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS50Q96JG6 U6.99-201ENST00000637524 83 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 AC099654.10-201ENST00000640395 161 ntBASIC3.29□□□□□ -1.88
VPS50Q96JG6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS50Q96JG6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VPS50Q96JG6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS50Q96JG6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS50Q96JG6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
VPS50Q96JG6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
VPS50Q96JG6 MIR208A-201ENST00000362287 71 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-37P-201ENST00000362692 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-884P-201ENST00000363889 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-11P-201ENST00000364234 107 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU1-33P-201ENST00000364249 162 ntBASIC3.28□□□□□ -1.88
VPS50Q96JG6 RNU6-7-201ENST00000364784 107 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 370 ms