Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CHMP6Q96FZ7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
CHMP6Q96FZ7 RNU6-1122P-201ENST00000384449 107 ntBASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 RNU6-482P-201ENST00000391068 107 ntBASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 RPS27P16-201ENST00000425758 201 ntBASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 USP9YP18-201ENST00000425912 695 ntBASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 USP9YP17-201ENST00000444617 696 ntBASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 AL035666.1-201ENST00000446195 348 ntBASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 AC093852.1-201ENST00000503587 266 ntBASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 AC026414.1-201ENST00000504046 698 ntBASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 AC093788.1-201ENST00000609356 927 ntBASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 HAUS6P2-201ENST00000433254 2404 ntBASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.1□□□□□ -2.23
CHMP6Q96FZ7 RNU6-1010P-201ENST00000362757 107 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 Y_RNA.99-201ENST00000363138 105 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 RNU6-707P-201ENST00000364647 95 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 SNORD1A-201ENST00000364968 72 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 RNU2-42P-201ENST00000410697 113 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 RPL23AP35-201ENST00000451906 501 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 SNRPFP4-201ENST00000456366 242 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AC087477.1-201ENST00000465747 340 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AC023538.1-201ENST00000534576 736 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AC090115.3-201ENST00000553218 849 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 SNRPGP1-201ENST00000553864 222 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AC012414.6-201ENST00000568241 401 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AC023043.2-201ENST00000589678 1026 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AL583856.2-201ENST00000606298 543 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AC012360.2-201ENST00000609349 391 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 uc_338.15-201ENST00000615470 191 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AL078604.3-201ENST00000615580 211 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 uc_338.12-201ENST00000616344 181 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AC009269.6-201ENST00000621778 588 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 MIR8063-201ENST00000621930 81 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 AC008993.2-201ENST00000631744 806 ntBASIC1.09□□□□□ -2.23
CHMP6Q96FZ7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CHMP6Q96FZ7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CHMP6Q96FZ7 AL391987.6-201ENST00000305671 199 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 RNU6-23P-201ENST00000363283 107 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 SNORA70.7-201ENST00000384159 133 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 BX664727.1-201ENST00000416024 466 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 CST2P1-201ENST00000425770 87 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 MTCO3P5-201ENST00000433620 714 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 AC104629.1-201ENST00000494226 508 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 RNU7-40P-201ENST00000516397 64 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 RAB11AP2-201ENST00000545905 639 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 SUB1P4-201ENST00000566062 339 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 HSPE1P19-201ENST00000603327 295 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 AC099654.9-201ENST00000637055 678 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 FARSBP1-201ENST00000435808 1778 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 MTND5P9-201ENST00000503854 1755 ntBASIC1.08□□□□□ -2.24
CHMP6Q96FZ7 AC233981.2-201ENST00000611524 1614 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 MIR302D-201ENST00000362275 68 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 FGF7P8-201ENST00000402994 292 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 FTH1P15-201ENST00000406984 280 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 AC004965.1-201ENST00000413033 213 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 AP1B1P2-201ENST00000416196 106 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 MTCO1P3-201ENST00000429327 192 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 DYNLT3P2-201ENST00000442517 295 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 RNU6-775P-201ENST00000459318 96 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 AC104563.1-201ENST00000476147 376 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 AL133373.1-201ENST00000497098 94 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 HMGN1P13-201ENST00000505795 138 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 RNU6-572P-201ENST00000516724 80 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 AC084364.2-201ENST00000546924 395 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 AP000942.3-201ENST00000603702 160 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 ICE2P2-201ENST00000483823 2787 ntBASIC1.07□□□□□ -2.24
CHMP6Q96FZ7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.06□□□□□ -2.24
CHMP6Q96FZ7 RNA5SP327-201ENST00000362494 101 ntBASIC1.06□□□□□ -2.24
CHMP6Q96FZ7 RNU6-743P-201ENST00000364151 106 ntBASIC1.06□□□□□ -2.24
CHMP6Q96FZ7 AC119751.3-201ENST00000399720 670 ntBASIC1.06□□□□□ -2.24
CHMP6Q96FZ7 MTCO1P56-201ENST00000401674 224 ntBASIC1.06□□□□□ -2.24
CHMP6Q96FZ7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.06□□□□□ -2.24
CHMP6Q96FZ7 AC139712.2-201ENST00000424302 339 ntBASIC1.06□□□□□ -2.24
CHMP6Q96FZ7 RPS6P15-201ENST00000431996 751 ntBASIC1.06□□□□□ -2.24
CHMP6Q96FZ7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.06□□□□□ -2.24
CHMP6Q96FZ7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.06□□□□□ -2.24
CHMP6Q96FZ7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms