Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 AC000403.1-201ENST00000613696 3585 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 RNU6-778P-201ENST00000363269 103 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 RNU6-128P-201ENST00000383976 107 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 PGBD4P6-201ENST00000421501 610 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 HMGB1P18-201ENST00000438801 619 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 RPL23AP14-201ENST00000468281 468 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 RPL7P43-201ENST00000478876 753 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 AC010265.1-201ENST00000513509 211 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 RNA5SP367-201ENST00000516557 118 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 AC105029.1-201ENST00000520250 669 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 AP000867.2-201ENST00000532468 320 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 RAB11AP2-201ENST00000545905 639 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 RNU6-85P-201ENST00000605989 107 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 AC104237.2-201ENST00000612456 443 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 uc_338.15-201ENST00000615470 191 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 MTND5P7-201ENST00000413558 1798 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM43Q96BQ3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
TRIM43Q96BQ3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 RNU6-384P-201ENST00000364900 104 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 Y_RNA.301-201ENST00000364990 103 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 AL391417.1-201ENST00000404100 426 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 RNA5SP229-201ENST00000410809 99 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 AC126124.2-201ENST00000413542 321 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 RPS15AP6-201ENST00000420703 385 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 AL139396.1-201ENST00000421137 167 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 HMGB1P9-201ENST00000429856 646 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 AL359672.1-201ENST00000442302 409 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 MRPS31P2-201ENST00000451581 518 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 MTCO1P29-201ENST00000496868 288 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 RNU6-1332P-201ENST00000516666 104 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 AC025423.5-201ENST00000550230 219 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 MTND4LP5-201ENST00000605152 292 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 FAM157A-202ENST00000615155 405 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 MIR622-201ENST00000638396 96 ntBASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM43Q96BQ3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 Y_RNA.184-201ENST00000363884 108 ntBASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 RNU6-214P-201ENST00000384130 107 ntBASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 Y_RNA.529-201ENST00000384586 119 ntBASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 HMGN2P8-201ENST00000391458 268 ntBASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 SKA2P1-201ENST00000425592 390 ntBASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 AC026801.1-201ENST00000497178 464 ntBASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 AC093331.1-201ENST00000521474 169 ntBASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 NACAP3-201ENST00000552100 481 ntBASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 AL391261.3-201ENST00000557194 520 ntBASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 RPS3AP23-202ENST00000574601 686 ntBASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 MIR3672-201ENST00000584290 82 ntBASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 OR1M4P-201ENST00000589199 287 ntBASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 APOOP1-201ENST00000604695 592 ntBASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM43Q96BQ3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 MTND4P29-201ENST00000503122 1372 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 AC138393.1-203ENST00000327086 343 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 AC022018.1-201ENST00000430685 241 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms